Detailed information NTG0328627

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: EH233_RS01060
• Genome accession: NZ_CP034058
• Coordinates: 235591..237219 (-)
• Length: 542 a.a.
• NCBI ID: WP_041456500.1
• Uniprot ID: -
• Organism: Anabaena sp. YBS01
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 230591..242219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EH233_RS01040 (EH233_01040)	gltX	231605..233050 (+)	1446	WP_011321519.1	glutamate--tRNA ligase	-
EH233_RS01045 (EH233_01045)	-	233134..233802 (-)	669	WP_011321518.1	2OG-Fe dioxygenase family protein	-
EH233_RS01050 (EH233_01050)	sfsA	234274..234999 (+)	726	WP_011321517.1	DNA/RNA nuclease SfsA	-
EH233_RS01055 (EH233_01055)	-	235008..235490 (+)	483	WP_041456504.1	gluconokinase	-
EH233_RS01060 (EH233_01060)	comA	235591..237219 (-)	1629	WP_041456500.1	DUF655 domain-containing protein	Machinery gene
EH233_RS01065 (EH233_01065)	-	237333..238502 (+)	1170	WP_011321514.1	cysteine desulfurase family protein	-
EH233_RS01070 (EH233_01070)	-	238519..240549 (-)	2031	WP_011321513.1	serine/threonine-protein kinase	-

Sequence

Protein

• Length: 542 a.a.
• Molecular weight: 61021.15 Da
• Isoelectric Point: 7.8981

>NTDB_id=328627 EH233_RS01060 WP_041456500.1 235591..237219(-) (comA) [Anabaena sp. YBS01]
MRIFPAFRNFWVFFLIVAIAACQKVQSHNNRPAPLPQDSFVKVYFNQSESSEYREPYRQQTRLGDNLEQQIIDAISQAKS
TIDVAVQELRLPRIAQALKDKQKAGIKVRVILENTYTRSLSNLTPDEVKKLPEREQARYQEYFKFVDLNQDNQLSPEEVN
QRDALIILQNAKIPWIDDQADGSAGSKLMHHKFVVVDNRIVIVTSANFTLSDVFGDFSNSSSLGNANNLLHIDSPELAAL
VTEEFNLMWGDGVGGKPDSKFGLNKPVRPPQKITLGDNTITVHFSPTSPTLPWTQSSNGLINESLNLANKSIDMALFVFS
EQRLANTLEKRHQQQVSIRALIDKQFAYRYYSEALDMMGIALGNKCRYEIDNRPWSNPVTTVGVPTLREGDLLHHKFSVI
DNQTVITGSHNWSDAANHGNDETLIVINNPTIAAHYEREFARLYAKAQVGVPAKVQAQIQQEQKQCGQIKTPTSSELTPT
QVVNINTANLAELETLPGVGKKLAQKIITARQQRKFVSSQDLDKVPGISPKMIENWQGRIQF

Nucleotide

• Length: 1629 bp

>NTDB_id=328627 EH233_RS01060 WP_041456500.1 235591..237219(-) (comA) [Anabaena sp. YBS01]
GTGCGGATTTTCCCAGCATTTAGGAATTTTTGGGTATTTTTTTTGATAGTGGCGATCGCCGCCTGTCAAAAAGTCCAATC
TCACAATAATCGTCCTGCACCTCTACCGCAAGACTCATTTGTGAAAGTTTACTTTAATCAATCCGAATCCTCAGAATATC
GAGAACCTTACCGTCAACAAACTCGACTGGGAGATAACTTAGAACAGCAGATTATTGACGCTATTTCTCAAGCTAAATCT
ACTATCGATGTAGCAGTACAAGAATTGCGTTTACCGAGAATCGCCCAAGCCCTCAAAGACAAACAAAAAGCGGGAATCAA
AGTCAGAGTAATTTTAGAAAATACCTATACTCGTTCTTTGAGTAACTTGACACCAGATGAAGTCAAGAAATTACCTGAAC
GGGAACAAGCACGCTATCAAGAATACTTTAAATTTGTAGACCTAAACCAAGATAATCAACTCAGTCCTGAGGAAGTTAAT
CAGAGGGATGCACTGATAATTTTACAAAATGCCAAAATTCCTTGGATAGATGATCAAGCTGATGGTTCAGCAGGTAGTAA
GTTGATGCACCATAAGTTTGTGGTTGTAGATAATCGCATAGTAATTGTGACTTCGGCAAACTTCACCTTAAGCGACGTTT
TCGGGGATTTCTCTAATTCTTCAAGTTTGGGAAATGCCAACAACCTATTACACATTGATAGCCCAGAATTAGCAGCTTTG
GTCACAGAAGAATTCAACCTCATGTGGGGTGATGGTGTTGGAGGTAAACCAGACAGTAAATTCGGTTTAAATAAACCTGT
ACGTCCTCCCCAAAAAATTACCTTGGGTGACAACACAATTACTGTGCATTTTTCCCCAACTTCACCCACCTTACCTTGGA
CTCAAAGCAGCAATGGCTTAATTAATGAAAGCTTAAATTTAGCGAATAAATCTATTGATATGGCGTTGTTTGTTTTTTCC
GAACAGCGTCTTGCTAATACATTAGAAAAACGTCATCAACAACAAGTCTCAATTCGAGCATTAATTGATAAACAATTCGC
CTATCGTTATTACAGCGAAGCTTTAGATATGATGGGAATTGCCCTGGGTAATAAATGCCGATATGAAATTGATAATCGAC
CTTGGTCTAATCCCGTTACTACGGTGGGCGTACCCACTTTACGAGAAGGAGACCTGCTACACCATAAATTTTCTGTTATC
GACAACCAAACGGTAATTACAGGTTCTCACAACTGGTCTGATGCAGCAAATCATGGCAATGATGAGACTTTGATAGTAAT
TAATAATCCCACAATTGCTGCTCATTATGAGCGTGAATTTGCTCGTCTTTACGCTAAAGCTCAAGTCGGTGTCCCAGCCA
AAGTCCAAGCACAAATTCAACAAGAACAAAAGCAATGTGGTCAAATTAAAACTCCTACTTCCAGTGAACTTACTCCTACT
CAAGTGGTGAATATCAATACAGCAAATTTGGCAGAATTGGAGACCTTACCCGGTGTAGGTAAAAAGCTAGCCCAAAAAAT
TATCACCGCCCGTCAGCAGAGAAAATTTGTCTCATCACAAGACTTGGATAAAGTACCTGGAATCAGTCCAAAGATGATAG
AAAATTGGCAAGGGCGTATTCAATTTTAG

Domains

Predicted by InterproScan.

• PLD-like domain (PLDc_2) (71-249)

• PLD-like domain (PLDc_2) (302-443)

• Helix-hairpin-helix motif (HHH_3) (481-540)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Synechocystis sp. PCC 6803	49.355	100	0.494