Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | FOY61_RS19230 | Genome accession | NZ_CP041771 |
| Coordinates | 4012028..4012624 (-) | Length | 198 a.a. |
| NCBI ID | WP_003087237.1 | Uniprot ID | Q9I3H9 |
| Organism | Pseudomonas aeruginosa strain A681 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4007028..4017624
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOY61_RS19210 (FOY61_19210) | - | 4007664..4009247 (+) | 1584 | WP_073666969.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FOY61_RS19215 (FOY61_19215) | - | 4009244..4010131 (+) | 888 | WP_003103932.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| FOY61_RS19220 (FOY61_19220) | - | 4010205..4010744 (+) | 540 | WP_003103931.1 | CbrC family protein | - |
| FOY61_RS19225 (FOY61_19225) | - | 4010757..4011905 (-) | 1149 | WP_003103930.1 | acyl-CoA dehydrogenase family protein | - |
| FOY61_RS19230 (FOY61_19230) | recR | 4012028..4012624 (-) | 597 | WP_003087237.1 | recombination mediator RecR | Machinery gene |
| FOY61_RS19235 (FOY61_19235) | - | 4012703..4013029 (-) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| FOY61_RS19240 (FOY61_19240) | dnaX | 4013075..4015156 (-) | 2082 | WP_047942976.1 | DNA polymerase III subunit gamma/tau | - |
| FOY61_RS19245 (FOY61_19245) | - | 4015193..4016059 (+) | 867 | WP_003120462.1 | ABC transporter substrate-binding protein | - |
| FOY61_RS19255 (FOY61_19255) | - | 4016313..4016690 (-) | 378 | WP_003083354.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21173.42 Da Isoelectric Point: 6.0063
>NTDB_id=328564 FOY61_RS19230 WP_003087237.1 4012028..4012624(-) (recR) [Pseudomonas aeruginosa strain A681]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=328564 FOY61_RS19230 WP_003087237.1 4012028..4012624(-) (recR) [Pseudomonas aeruginosa strain A681]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |