Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   FOY61_RS11365 Genome accession   NZ_CP041771
Coordinates   2318545..2318901 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain A681     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2313545..2323901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOY61_RS11340 (FOY61_11340) fabF 2313757..2315001 (+) 1245 WP_023115233.1 beta-ketoacyl-ACP synthase II -
  FOY61_RS11345 (FOY61_11345) pabC 2315001..2315816 (+) 816 WP_003452483.1 aminodeoxychorismate lyase -
  FOY61_RS11350 (FOY61_11350) mltG 2315822..2316871 (+) 1050 WP_003104128.1 endolytic transglycosylase MltG -
  FOY61_RS11355 (FOY61_11355) tmk 2316900..2317532 (+) 633 WP_003091125.1 dTMP kinase -
  FOY61_RS11360 (FOY61_11360) - 2317525..2318511 (+) 987 WP_003110200.1 DNA polymerase III subunit delta' -
  FOY61_RS11365 (FOY61_11365) pilZ 2318545..2318901 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  FOY61_RS11370 (FOY61_11370) - 2318916..2319692 (+) 777 WP_003091117.1 TatD family hydrolase -
  FOY61_RS11375 (FOY61_11375) - 2319918..2321051 (-) 1134 WP_023115234.1 aminotransferase class V-fold PLP-dependent enzyme -
  FOY61_RS11380 (FOY61_11380) - 2321137..2321775 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  FOY61_RS11385 (FOY61_11385) - 2321942..2322838 (+) 897 WP_023115235.1 radical SAM protein -
  FOY61_RS11390 (FOY61_11390) - 2322903..2323535 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=328546 FOY61_RS11365 WP_003091119.1 2318545..2318901(+) (pilZ) [Pseudomonas aeruginosa strain A681]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=328546 FOY61_RS11365 WP_003091119.1 2318545..2318901(+) (pilZ) [Pseudomonas aeruginosa strain A681]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449


Multiple sequence alignment