Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EG219_RS00240 | Genome accession | NZ_CP034037 |
| Coordinates | 45602..45892 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain BCSo1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 40602..50892
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG219_RS00200 (EG219_00200) | darA | 40619..40948 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| EG219_RS00205 (EG219_00205) | - | 40961..41401 (+) | 441 | WP_004264730.1 | DUF327 family protein | - |
| EG219_RS00210 (EG219_00210) | holB | 41413..42402 (+) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| EG219_RS00215 (EG219_00215) | ricT | 42405..43232 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| EG219_RS00220 (EG219_00220) | yabA | 43247..43606 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| EG219_RS00225 (EG219_00225) | - | 43667..44410 (+) | 744 | WP_007409920.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EG219_RS00230 (EG219_00230) | - | 44397..44696 (+) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| EG219_RS00235 (EG219_00235) | rsmI | 44671..45552 (+) | 882 | WP_020953847.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EG219_RS00240 (EG219_00240) | abrB | 45602..45892 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| EG219_RS00245 (EG219_00245) | metG | 46376..48367 (+) | 1992 | WP_007409923.1 | methionine--tRNA ligase | - |
| EG219_RS00250 (EG219_00250) | - | 48443..49210 (+) | 768 | WP_007409924.1 | TatD family hydrolase | - |
| EG219_RS00255 (EG219_00255) | - | 49345..50670 (+) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=328505 EG219_RS00240 WP_169510469.1 45602..45892(-) (abrB) [Bacillus velezensis strain BCSo1]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=328505 EG219_RS00240 WP_169510469.1 45602..45892(-) (abrB) [Bacillus velezensis strain BCSo1]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |