Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | EGH16_RS10135 | Genome accession | NZ_CP034032 |
| Coordinates | 1717447..1717842 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FQ01 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1712447..1722842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGH16_RS10080 (EGH16_10080) | - | 1712749..1712994 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| EGH16_RS10090 (EGH16_10090) | - | 1713106..1713534 (+) | 429 | WP_020997399.1 | CopD family protein | - |
| EGH16_RS10095 (EGH16_10095) | - | 1713546..1714022 (+) | 477 | WP_047920274.1 | CYTH domain-containing protein | - |
| EGH16_RS10100 (EGH16_10100) | - | 1714052..1714540 (-) | 489 | WP_003689852.1 | dihydrofolate reductase | - |
| EGH16_RS10105 (EGH16_10105) | aroG | 1714608..1715663 (-) | 1056 | WP_003689853.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| EGH16_RS13740 | - | 1715825..1716052 (-) | 228 | WP_153707886.1 | hypothetical protein | - |
| EGH16_RS14515 | - | 1716087..1716239 (+) | 153 | WP_229684494.1 | hypothetical protein | - |
| EGH16_RS14705 (EGH16_10120) | - | 1716281..1716577 (+) | 297 | WP_003689859.1 | hypothetical protein | - |
| EGH16_RS14710 (EGH16_10125) | - | 1716574..1716813 (+) | 240 | WP_010359213.1 | membrane protein | - |
| EGH16_RS14845 (EGH16_10130) | - | 1717366..1717513 (+) | 148 | Protein_1752 | peptidase | - |
| EGH16_RS10135 (EGH16_10135) | comE | 1717447..1717842 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| EGH16_RS14525 (EGH16_10140) | - | 1717944..1718063 (-) | 120 | Protein_1754 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=328449 EGH16_RS10135 WP_003703428.1 1717447..1717842(-) (comE) [Neisseria gonorrhoeae strain FQ01]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=328449 EGH16_RS10135 WP_003703428.1 1717447..1717842(-) (comE) [Neisseria gonorrhoeae strain FQ01]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |