Detailed information NTG0328408

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: EGH17_RS11610
• Genome accession: NZ_CP034030
• Coordinates: 1938487..1941594 (+)
• Length: 1035 a.a.
• NCBI ID: WP_165864723.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FQ02
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1933487..1946594

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGH17_RS11590 (EGH17_11590)	-	1934027..1934476 (-)	450	WP_003692085.1	CopD family copper resistance protein	-
EGH17_RS11595 (EGH17_11595)	waaA	1934517..1935788 (-)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
EGH17_RS11600 (EGH17_11600)	gnd	1935851..1937299 (-)	1449	WP_047918023.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
EGH17_RS11605 (EGH17_11605)	-	1937379..1937642 (-)	264	WP_017147189.1	hypothetical protein	-
EGH17_RS11610 (EGH17_11610)	pilC	1938487..1941594 (+)	3108	WP_165864723.1	PilC family type IV pilus tip adhesin	Machinery gene
EGH17_RS11630 (EGH17_11630)	-	1942577..1942861 (+)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
EGH17_RS11640 (EGH17_11640)	yccS	1943415..1945565 (-)	2151	WP_003697785.1	YccS family putative transporter	-

Sequence

Protein

• Length: 1035 a.a.
• Molecular weight: 112556.79 Da
• Isoelectric Point: 9.7919

>NTDB_id=328408 EGH17_RS11610 WP_165864723.1 1938487..1941594(+) (pilC) [Neisseria gonorrhoeae strain FQ02]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGAMAQTREYAIIMNGQNQPEVKSSVPYSIKDKDRKRKYTHQNTQGGGGSVS
FNNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDSLKGRANAVDWIRTTRIALAGYSYAGVICRNITGCPKLVYKTQFT
FDQQGLKKKAGSKLDIYEDKSRENSPIYKLSDYPWLGVSFNLGSENTVKDGKSFNKLISSFGEDNNNQTIVSTTEDYPIS
LGDGRREHTAVAYYLNAKLHLLDKKQIQNITGKTVRLGVLKPSIDVRTRNTGFGFLNFWAKWDIKDNGQIPVKLGLPEVK
AGRCINEPNPNKNTQAPSPALTAPALWFGPGQNGKVQMYSASVSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGE
IKSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGPDND
NKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRK
DIQSQESTLAKELRAFAEKGYVGDRYGVDGGFVLRQVNLNGQDRVFMFGAMGLGGRGAYALDLSKINGNYPAAAPLFDVK
DGDNNGKNRVEVKLGYTVGTPQIGKTQNGTYSAFLASGYAAKKIDDSTNKTALYVYDLKDILGTPIAKIEAPGGKGGLSS
PTLVDKDLDGTVDIAYAGDRGGNMYRFDLSNSDPNKWSAKAIFEGTKPITSAPAVSRLKDKRVVIFGTGSDLTEDDVLDT
KEQYIYGIFDDDKGTGTVKVTVQNGTAGGLLEQNLMQENKTLFLNKRSDGSGSKGWAVKLTGGQRVTVKPTVVLRTAFVT
IRKYNDGGCGAETAILGINTADGGALTPRSARPIVPEANTAVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYDKPV
NVRYLDETETDGFSTTADGDAGGSGIDPADRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3108 bp

>NTDB_id=328408 EGH17_RS11610 WP_165864723.1 1938487..1941594(+) (pilC) [Neisseria gonorrhoeae strain FQ02]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGCGATGGCGCAAACCCGTGAATACGCTATTATCATGAACGGGCAAAACCAGCCCGAGGTAAAGTCGAGTG
TGCCATATTCAATAAAGGACAAAGACAGGAAGCGCAAATATACTCATCAGAACACACAAGGAGGAGGAGGCTCTGTCTCA
TTCAACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGG
CAAGGTTTCCGGTTTTGATACCGATAGTCTGAAAGGGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGCATCGCGC
TGGCAGGCTACAGCTACGCCGGTGTCATATGCAGAAACATCACAGGCTGTCCCAAACTTGTCTATAAAACCCAATTTACC
TTCGATCAACAAGGGTTGAAAAAAAAGGCAGGCAGCAAGCTGGATATATACGAAGACAAAAGCCGCGAAAATTCGCCCAT
TTACAAATTGTCGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCAGCGAGAATACCGTCAAAGATGGCAAATCAT
TCAACAAATTGATATCTTCTTTTGGTGAAGACAATAATAATCAAACCATTGTCTCTACGACAGAAGACTACCCTATTTCC
CTTGGCGACGGGCGGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAGCTGCACCTGCTGGATAAAAAACAGAT
TCAAAATATCACCGGCAAAACAGTGCGGTTGGGTGTCTTGAAGCCGAGCATCGATGTGCGGACAAGAAATACGGGGTTCG
GCTTTCTAAATTTTTGGGCTAAGTGGGACATTAAAGATAACGGGCAGATTCCGGTCAAGCTCGGCCTGCCGGAAGTCAAA
GCAGGCCGCTGCATCAACGAACCGAACCCCAATAAGAATACCCAAGCCCCTTCGCCGGCACTGACCGCCCCCGCGCTGTG
GTTCGGCCCTGGGCAAAATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCCGCA
TCTTCCTCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGGCCGCTATTCCCTCAAATCTTTGAATGATGGTGAG
ATTAAAAGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACTGAA
TGGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTGTTA
AGGAAGCGAACGTCAATCTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGAC
AATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGGCAATCGCGA
TTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATA
TCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGCAAG
GATATTCAAAGCCAAGAATCCACCCTTGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGG
CGTGGACGGCGGCTTTGTCTTGCGTCAAGTTAACTTAAACGGACAAGACCGCGTGTTTATGTTCGGCGCAATGGGCCTTG
GCGGCAGAGGCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCTCCCCTGTTTGATGTCAAA
GATGGCGATAATAACGGCAAAAATCGCGTGGAAGTGAAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCA
AAACGGCACATACTCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAAAAATTGACGACTCAACAAATAAAACCGCGCTGT
ATGTATATGATTTGAAAGACATCTTAGGTACGCCGATTGCAAAAATCGAAGCACCCGGCGGCAAAGGCGGGCTTTCGTCC
CCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTT
TGATTTGAGCAATTCCGATCCTAATAAATGGTCTGCAAAGGCTATTTTCGAAGGCACAAAACCGATTACCTCCGCGCCCG
CCGTTTCCCGACTGAAAGACAAACGCGTGGTTATCTTCGGTACGGGCAGCGATTTGACCGAAGATGATGTACTCGATACG
AAAGAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGC
AGGCGGGCTGCTCGAGCAAAACCTTATGCAGGAAAATAAAACATTATTCCTGAACAAGAGATCCGACGGTTCGGGCAGCA
AGGGCTGGGCGGTGAAATTGACAGGCGGACAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACC
ATCCGCAAATATAACGACGGCGGCTGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGAC
TCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATACGGCTGTCGCACAATATTCCGGCCATAAGACAACCTCCAAAG
GCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAACCGGTT
AATGTGCGCTACCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGA
CCCCGCCGACAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGGGTGCGCACCCTGCTGATGAACGATTTGG
ACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (508-845)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.384	100	0.746