Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | FNS63_RS00410 | Genome accession | NZ_CP041770 |
| Coordinates | 73675..74346 (+) | Length | 223 a.a. |
| NCBI ID | WP_003154900.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain DH8030 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 68675..79346
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNS63_RS00395 (FNS63_00395) | - | 69484..70482 (+) | 999 | WP_003154904.1 | LacI family DNA-binding transcriptional regulator | - |
| FNS63_RS00400 (FNS63_00400) | - | 70556..72001 (+) | 1446 | WP_083058981.1 | tagaturonate reductase | - |
| FNS63_RS00405 (FNS63_00405) | - | 71998..73491 (+) | 1494 | WP_003154902.1 | UxaA family hydrolase | - |
| FNS63_RS00410 (FNS63_00410) | scnR | 73675..74346 (+) | 672 | WP_003154900.1 | response regulator transcription factor | Regulator |
| FNS63_RS00415 (FNS63_00415) | - | 74343..75701 (+) | 1359 | WP_003154898.1 | HAMP domain-containing sensor histidine kinase | - |
| FNS63_RS00420 (FNS63_00420) | - | 75821..76756 (+) | 936 | WP_003154897.1 | ABC transporter ATP-binding protein | - |
| FNS63_RS00425 (FNS63_00425) | - | 76737..77468 (+) | 732 | WP_003154895.1 | ABC transporter permease | - |
| FNS63_RS00430 (FNS63_00430) | - | 77486..77677 (+) | 192 | WP_003154894.1 | hypothetical protein | - |
| FNS63_RS00435 (FNS63_00435) | - | 77743..78993 (+) | 1251 | WP_060386888.1 | sensor histidine kinase | - |
Sequence
Protein
Download Length: 223 a.a. Molecular weight: 26422.68 Da Isoelectric Point: 6.5038
>NTDB_id=328367 FNS63_RS00410 WP_003154900.1 73675..74346(+) (scnR) [Bacillus amyloliquefaciens strain DH8030]
MNNILYIEDDQEIGQFVKDDLEDRGYMIIWLTSSYNYETYIEKADLIVLDIMMPGLDGFTIGQRMKKTHPQIPLLLLTAR
TGLEDKLKGLGFADDYVTKPFHPDELAARIEVLLRRFDKTAIHELKLKHLSVHLKEKRILNHQSHEEIFLTDKQLRIFLL
LLRHPNQILTKEQIYENIWEQPYIEGDKTLMVHIRHLRQKIEINPNEPEILETIRGIGYRIKQ
MNNILYIEDDQEIGQFVKDDLEDRGYMIIWLTSSYNYETYIEKADLIVLDIMMPGLDGFTIGQRMKKTHPQIPLLLLTAR
TGLEDKLKGLGFADDYVTKPFHPDELAARIEVLLRRFDKTAIHELKLKHLSVHLKEKRILNHQSHEEIFLTDKQLRIFLL
LLRHPNQILTKEQIYENIWEQPYIEGDKTLMVHIRHLRQKIEINPNEPEILETIRGIGYRIKQ
Nucleotide
Download Length: 672 bp
>NTDB_id=328367 FNS63_RS00410 WP_003154900.1 73675..74346(+) (scnR) [Bacillus amyloliquefaciens strain DH8030]
ATGAATAACATTTTATACATTGAAGATGACCAAGAAATTGGCCAATTTGTAAAGGATGATTTAGAAGATCGGGGCTATAT
GATTATATGGCTCACTTCTTCCTATAATTACGAAACATATATAGAAAAGGCTGATCTGATCGTGCTTGATATAATGATGC
CCGGTTTAGATGGATTTACAATCGGTCAAAGGATGAAAAAAACACATCCACAGATCCCGCTCTTGCTTTTAACAGCGAGA
ACGGGTCTGGAAGATAAACTGAAAGGCTTAGGATTTGCGGATGATTACGTGACAAAACCCTTTCATCCCGATGAACTGGC
CGCTCGAATCGAAGTATTATTAAGAAGATTTGACAAGACTGCCATTCATGAATTGAAGCTAAAACACTTAAGTGTCCACT
TGAAAGAAAAAAGAATTTTAAATCATCAAAGTCATGAGGAAATATTTTTAACTGATAAGCAGTTAAGGATTTTTTTGCTT
TTGCTTAGACATCCCAATCAAATATTAACAAAGGAACAAATTTATGAAAATATTTGGGAGCAGCCTTATATCGAAGGGGA
TAAGACGTTGATGGTACATATCAGGCATTTACGGCAAAAAATCGAGATCAATCCAAATGAGCCGGAAATTCTTGAAACGA
TCAGAGGGATTGGATACAGGATTAAACAATGA
ATGAATAACATTTTATACATTGAAGATGACCAAGAAATTGGCCAATTTGTAAAGGATGATTTAGAAGATCGGGGCTATAT
GATTATATGGCTCACTTCTTCCTATAATTACGAAACATATATAGAAAAGGCTGATCTGATCGTGCTTGATATAATGATGC
CCGGTTTAGATGGATTTACAATCGGTCAAAGGATGAAAAAAACACATCCACAGATCCCGCTCTTGCTTTTAACAGCGAGA
ACGGGTCTGGAAGATAAACTGAAAGGCTTAGGATTTGCGGATGATTACGTGACAAAACCCTTTCATCCCGATGAACTGGC
CGCTCGAATCGAAGTATTATTAAGAAGATTTGACAAGACTGCCATTCATGAATTGAAGCTAAAACACTTAAGTGTCCACT
TGAAAGAAAAAAGAATTTTAAATCATCAAAGTCATGAGGAAATATTTTTAACTGATAAGCAGTTAAGGATTTTTTTGCTT
TTGCTTAGACATCCCAATCAAATATTAACAAAGGAACAAATTTATGAAAATATTTGGGAGCAGCCTTATATCGAAGGGGA
TAAGACGTTGATGGTACATATCAGGCATTTACGGCAAAAAATCGAGATCAATCCAAATGAGCCGGAAATTCTTGAAACGA
TCAGAGGGATTGGATACAGGATTAAACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
36 |
100 |
0.363 |