Detailed information NTG0328307

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: EGH20_RS11555
• Genome accession: NZ_CP034026
• Coordinates: 1962865..1965945 (-)
• Length: 1026 a.a.
• NCBI ID: WP_124724016.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FQ20
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1957865..1970945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGH20_RS11525 (EGH20_11525)	yccS	1959044..1961194 (+)	2151	WP_003694501.1	YccS family putative transporter	-
EGH20_RS11540 (EGH20_11540)	-	1961822..1962106 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
EGH20_RS11555 (EGH20_11555)	pilC	1962865..1965945 (-)	3081	WP_124724016.1	PilC family type IV pilus tip adhesin	Machinery gene
EGH20_RS11565 (EGH20_11565)	-	1966789..1967052 (+)	264	WP_017147189.1	hypothetical protein	-
EGH20_RS11570 (EGH20_11570)	gnd	1967132..1968580 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
EGH20_RS11575 (EGH20_11575)	waaA	1968643..1969914 (+)	1272	WP_025455875.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
EGH20_RS11580 (EGH20_11580)	-	1969955..1970404 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1026 a.a.
• Molecular weight: 111397.38 Da
• Isoelectric Point: 9.6992

>NTDB_id=328307 EGH20_RS11555 WP_124724016.1 1962865..1965945(-) (pilC) [Neisseria gonorrhoeae strain FQ20]
MNKTLKRQVFRHTALYAAILMFSHTGGGAMAQTHEYAIIMNARNQPEVRQNGQYSTLREKDRKRKFDFNANGGGGGSVSF
NNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDRLKKRNNAVDWIRTTRIALAGYSYAGVRCGSTSGCPKLVYKTRFSF
DNTDLLKTGGRLDRHTESSRENSPIYKLKDYPWLGVSFNLSSENTVKDGRSSNKLISSFSEGNNNQTIVSTTEDHPISLG
GSQREHTAVAYFLNAKLHLLDKKKIENIASGKTVQLGILKPSIDVRKGNTGLSGILSFWATWDIKDTGQIPVKLGLQVKA
GRCTNAAHPNPKVKPLSPALTAPALWFGPAQNGKVQMYSASVSTYPDSSSSRIFLQELKTKTDPGRPGRYSLKPLSDNEI
KGKEPSFTSRQTIIRLDGGVQQIKLDRSKGEVVAFVNLKGNTNNDTFGIVKEANVNLNADEWKKVLLPWTVRSPGNDDKF
KSINREPGKYSQRYRIRDNGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRKDIEG
NDSDLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFMFGAMGFGGRGAYALDLSKIDGNYPAAAPLFDVKDGDNNGKN
RVEVKLGYTVGTPQIGKTQNGKYAAFLASGYAAKDIVSSNNKTALYVYDLNNTLGTLIAKIDVPGGKGGLSSPTLVDKDL
DGIVDIAYAGDRGGNMYRFDLSNSDPSKWSVSTIFEGGKPITSAPAVSRLADKRVVIFGTGSDLSEDDVLNTDEQYIYGI
FDDDEGTVKVTVQNGTGGGLLEQTLTKENNTLFLSNNKASGGSADKGWVVKLKEGERVTVKPIVVLRTAFVTIRSYTGAD
KCGAETAILGINTADGGALTPRSARPIVPDNQVAQYSGHKTTSKGKSIPIGCMEKDGKTVCPNGYVYEKPVNVRYLDETE
TDGFSTTADGDAGGSGIDPADRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3081 bp

>NTDB_id=328307 EGH20_RS11555 WP_124724016.1 1962865..1965945(-) (pilC) [Neisseria gonorrhoeae strain FQ20]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGCGATGGCGCAAACCCATGAATACGCTATTATCATGAACGCGCGAAACCAGCCCGAGGTACGGCAGAATGGGCAAT
ATTCAACCTTAAGGGAAAAAGACAGGAAACGCAAATTTGACTTTAATGCGAACGGAGGGGGTGGAGGTTCTGTCTCATTC
AACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAA
GGTTTCCGGTTTTGATACCGATAGGCTGAAAAAGCGCAACAATGCCGTTGATTGGATTCGTACCACCCGCATCGCGCTGG
CAGGCTACAGCTACGCCGGTGTCCGTTGCGGAAGTACCTCAGGCTGTCCCAAACTTGTCTATAAAACCCGATTTTCCTTC
GATAATACCGACTTGCTAAAAACAGGAGGCAGGCTGGATAGGCACACAGAGTCAAGCCGCGAAAATTCGCCCATTTACAA
ATTGAAAGATTATCCATGGTTGGGCGTATCTTTCAATTTGAGCAGCGAGAATACCGTCAAAGATGGCAGATCATCCAACA
AATTGATATCTTCTTTTAGTGAAGGCAATAATAATCAAACCATCGTCTCTACGACAGAAGACCACCCTATTTCCCTTGGC
GGCTCGCAGCGCGAACATACCGCCGTGGCCTATTTTCTGAACGCCAAACTGCACCTGCTGGATAAAAAAAAGATTGAAAA
TATCGCGTCAGGCAAAACAGTGCAGTTGGGTATCTTGAAGCCGAGCATCGATGTGCGGAAAGGAAATACGGGGCTTAGCG
GCATTCTATCTTTTTGGGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCAAGTCAAAGCC
GGGCGCTGCACCAACGCCGCCCACCCCAATCCCAAGGTCAAACCCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTT
CGGCCCTGCGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCCGCATCT
TCCTCCAAGAGCTGAAAACTAAAACCGACCCCGGCAGGCCCGGCCGCTATTCCCTCAAACCCTTGAGTGATAATGAGATT
AAAGGTAAAGAGCCGAGTTTCACAAGTCGGCAAACAATCATCCGATTGGATGGCGGCGTACAGCAGATCAAACTGGATAG
AAGCAAGGGTGAGGTCGTCGCTTTTGTCAATTTAAAGGGAAACACCAACAACGACACTTTCGGCATTGTTAAGGAAGCGA
ACGTCAATCTTAACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGAGTCCCGGTAATGACGATAAATTT
AAATCAATTAACCGAGAACCAGGCAAATACAGCCAAAGATACCGCATCCGCGACAACGGCAATCGCGATTTGGGCGACAT
CGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATATCTTCAAAAAAA
ACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGTAAGGATATTGAAGGC
AATGACTCCGACCTCGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGG
CTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATGTTCGGCGCGATGGGTTTTGGCGGCAGAGGCGCGTATGCCTTGG
ATTTAAGCAAAATCGACGGAAATTATCCGGCCGCCGCTCCCCTGTTTGATGTCAAAGATGGCGATAATAACGGCAAAAAT
CGCGTGGAAGTGAAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAAAACCCAAAACGGCAAATACGCCGCCTTCCT
CGCCTCCGGTTATGCGGCTAAAGATATTGTCAGCAGCAATAATAAAACCGCGCTGTATGTATATGATTTGAACAACACCT
TAGGTACGCTGATTGCAAAAATCGATGTGCCCGGCGGCAAAGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTG
GACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCAATTCCGATCCTAG
TAAATGGTCTGTAAGCACTATTTTCGAAGGCGGGAAGCCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAAC
GCGTGGTTATCTTCGGCACGGGCAGCGATTTGAGTGAAGATGATGTACTGAATACGGACGAACAATATATTTACGGTATC
TTTGACGACGATGAGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGGCTGCTCGAGCAAACGCTTACGAA
GGAAAATAACACCTTGTTCCTGAGCAATAATAAGGCATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTGAAGG
AAGGAGAACGCGTTACCGTCAAACCGATCGTGGTATTGCGTACCGCCTTTGTCACCATCCGCAGCTATACGGGCGCGGAC
AAATGTGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGAT
TGTGCCGGATAACCAGGTTGCGCAATATTCCGGCCATAAGACAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGG
AAAAAGACGGTAAAACCGTCTGCCCGAACGGATATGTTTACGAAAAACCGGTTAATGTGCGTTATCTGGATGAAACGGAA
ACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGACAGGCGTCCCGGCAAAAA
CAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGACATTACCGGCCCGATGT
GCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (504-838)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.187	100	0.748