Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FO444_RS02210 Genome accession   NZ_CP041759
Coordinates   427705..428517 (-) Length   270 a.a.
NCBI ID   WP_003131583.1    Uniprot ID   Q9CIG7
Organism   Lactococcus lactis subsp. lactis strain IMAU11823     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 422705..433517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FO444_RS02185 (FO444_02205) ytpR 422931..423557 (+) 627 WP_003131594.1 YtpR family tRNA-binding protein -
  FO444_RS02190 (FO444_02210) - 423720..425060 (+) 1341 WP_023188995.1 FAD-dependent oxidoreductase -
  FO444_RS02195 (FO444_02215) - 425147..425538 (+) 392 Protein_422 single-stranded DNA-binding protein -
  FO444_RS02200 (FO444_02220) groES 425658..425942 (+) 285 WP_003131589.1 co-chaperone GroES -
  FO444_RS02205 (FO444_02225) groL 426030..427658 (+) 1629 WP_003131585.1 chaperonin GroEL -
  FO444_RS02210 (FO444_02230) vicX 427705..428517 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  FO444_RS02215 (FO444_02235) vicK 428686..430128 (-) 1443 WP_012897229.1 cell wall metabolism sensor histidine kinase WalK Regulator
  FO444_RS02220 (FO444_02240) yycF 430121..430822 (-) 702 WP_003131580.1 response regulator YycF -
  FO444_RS02225 (FO444_02245) tmk 431000..431635 (+) 636 WP_012897230.1 dTMP kinase -
  FO444_RS02230 (FO444_02250) - 431768..432627 (+) 860 Protein_429 DNA polymerase III subunit delta' -
  FO444_RS02235 (FO444_02255) yaaT 432679..433461 (+) 783 WP_211752553.1 stage 0 sporulation family protein Regulator

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30522.37 Da        Isoelectric Point: 5.8494

>NTDB_id=328290 FO444_RS02210 WP_003131583.1 427705..428517(-) (vicX) [Lactococcus lactis subsp. lactis strain IMAU11823]
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
DLYANEDTWSELDSKNALGKIPVEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFSIHGNKTKRIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKKDLKILDTSHEHASQLYDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=328290 FO444_RS02210 WP_003131583.1 427705..428517(-) (vicX) [Lactococcus lactis subsp. lactis strain IMAU11823]
ATGACTGAACAAAATGGCTTTAAATATTCCATTTTAGCCTCTGGTTCAACAGGAAATTCTTTTTACTTAGAAACTCCAAA
GAAAAAAATTCTTGTTGATGCCGGACTATCTGGAAAAAAAATAGAAAGTTTACTATCAGAAATTGACCGTGACATTCATG
ATATTGATGCTTTATTAATTACCCATGAACATAGTGACCATATCAAAGGGATTGGTGTTTTGGCAAGAAAATATGGTATT
GACCTTTACGCAAATGAAGATACTTGGTCTGAACTAGATAGTAAAAATGCTTTAGGAAAAATCCCTGTTGAACAAAAACA
TCTGTTTGAAATGGGAAAAACAATGACTTTTGGTGATATTGATATTGAATCTTTCGGCGTGAGTCACGATGCTATCGCAC
CACAGTTTTATCGTTTCATGAAAGATAACAAAAGTTTTGTTATGCTAACTGATACAGGTTATGTATCCGATAGAATGCGT
GGAACCATTGAAAATGCAGATGCTTATCTTATGGAATCAAACCATGACATTGAGATACTCCGCATGGGAGCCTATCCTTG
GCGGACAAAGCAACGTATCCTAAGTGACCAAGGCCACTTATCTAATGAGGACGGCGCTGAGGCTGCTTTTAGTATTCATG
GTAATAAGACAAAACGAATTTTTCTAGGGCACTTGAGTTTAAATAATAATATCAAAGAACTTGCTCATCTTACTATGGAT
GGTTACTTACAGCAACATGATGTCGATACCAAAAAGGACTTGAAGATCCTTGATACTAGTCACGAACATGCTAGTCAACT
TTACGATATTTAG

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

68.519

100

0.685

Multiple sequence alignment