Detailed information NTG0328210

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: EGH13_RS11625
• Genome accession: NZ_CP034022
• Coordinates: 1958006..1961116 (-)
• Length: 1036 a.a.
• NCBI ID: WP_124693377.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FQ36
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1953006..1966116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGH13_RS11600 (EGH13_11600)	-	1953090..1954316 (+)	1227	WP_003690199.1	PilT/PilU family type 4a pilus ATPase	-
EGH13_RS11605 (EGH13_11605)	yccS	1954433..1956583 (+)	2151	WP_003690198.1	YccS family putative transporter	-
EGH13_RS11625 (EGH13_11625)	pilC	1958006..1961116 (-)	3111	WP_124693377.1	PilC family type IV pilus tip adhesin	Machinery gene
EGH13_RS11640 (EGH13_11640)	-	1961959..1962222 (+)	264	WP_017147189.1	hypothetical protein	-
EGH13_RS11645 (EGH13_11645)	gnd	1962302..1963750 (+)	1449	WP_047918633.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
EGH13_RS11650 (EGH13_11650)	waaA	1963813..1965084 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
EGH13_RS11655 (EGH13_11655)	-	1965125..1965574 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1036 a.a.
• Molecular weight: 113124.47 Da
• Isoelectric Point: 10.0042

>NTDB_id=328210 EGH13_RS11625 WP_124693377.1 1958006..1961116(-) (pilC) [Neisseria gonorrhoeae strain FQ36]
MNKTLKRRVFRHTALYTAILMFSHTGGGGGQAQARDYAIIMNGRNQPEVKSNVPSSIKDKDRKRTFSHTSQTNWRGQQNN
FISFDNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDRLKKRNNAVDWIRTTRIALAGYSYEGVVCRSGTGCPKLVYKT
RFSFDNPDLVKNAGKLDRYTDLSRENSPIYKLKDYPWLGVSFNLSSENTVKDSKLSNKLISSFSESNNNQTIVSTTEDHP
ISLGGSQREHTAVAYYLNAKLHLLDKKGIGDIAPGKTVRLGLLKPSIDVRKGNTGLSGILSFNATWDIKDTGQIPVKLGL
QVKAGRCINKPNPNKNTKAPSPALTAPALWFGPRQDGKVQMYSASVSTYPDSSSSKIFLQNLSRNDDKNKPGRYSLKPLS
ENEIKSKEPRFNGRQTVIRLDSGVQLIKLNGSKDEVVIFGNNGNNGTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNK
FKLINQKPDRYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKTGTDERSYNLKLSYIPGTMERKDIEG
NDSDLAKELRTFAEKGYVGDRYGVDGGFVLRQVNLNGQDRVFMFGAMGLGGRGAYALDLSKINENYPAAAPLFDVKNGDK
NGKNGKNGKNRVEVELGYTVGTPQIGKTRSGKYAAFLASGYAAKDIGSGDNKTALYVYDLNNTLGTPIAKIEVKDGKGGL
SSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSNSDPNKWSVRTIFEGTKPITSAPAVSRLKDKRVVIFGTGSDLTEDDVL
DTKEQYIYGIFDDDKAANNVNASRGVLGSGLLEQHLTQENKTLFLNKRSDGSGSKGWAVKLTGGRRVTVKPTVVLRTAFV
TIRKYKDDGCGAETAILGINTADGGALTPRSARPIVPEANTAVAQYSGHKKTAGGKSVPIGCMEKGGKTVCPNGYVYDKP
VNVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3111 bp

>NTDB_id=328210 EGH13_RS11625 WP_124693377.1 1958006..1961116(-) (pilC) [Neisseria gonorrhoeae strain FQ36]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATACCGCCATATTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGCAGGCGCAAGCCCGTGACTACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGTCGAATGTGC
CATCTTCAATAAAGGACAAAGACAGGAAGCGGACATTTAGCCATACGAGCCAGACAAACTGGCGGGGCCAACAAAACAAT
TTTATCTCATTCGACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCC
GCCCTACGGCAAGGTTTCCGGTTTTGATACCGATAGGCTGAAAAAGCGCAACAATGCCGTTGATTGGATTCGTACCACCC
GCATCGCGCTGGCAGGCTACAGCTACGAAGGTGTCGTATGCAGAAGCGGCACAGGCTGTCCCAAACTTGTCTATAAAACC
CGATTTTCCTTCGATAATCCCGACTTGGTAAAAAATGCGGGCAAGCTGGATAGGTACACAGACCTAAGCCGCGAAAATTC
GCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGAGCAGCGAGAATACCGTCAAAGATAGCA
AATTATCCAACAAATTGATATCTTCTTTTAGTGAAAGCAATAATAATCAAACCATCGTCTCTACGACAGAAGACCACCCT
ATTTCCCTTGGCGGCTCGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGATAAAAA
AGGGATTGGAGATATCGCGCCAGGCAAAACAGTGCGGTTGGGTCTCTTGAAGCCGAGCATCGATGTGCGGAAAGGAAATA
CGGGGCTTAGCGGCATTCTATCTTTTAATGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTG
CAAGTCAAAGCAGGCCGCTGCATCAATAAACCGAACCCCAATAAGAATACCAAAGCCCCTTCGCCGGCACTGACCGCCCC
CGCGCTGTGGTTCGGACCTAGGCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGACAGTTCGA
GCAGCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAACCCTTGAGT
GAGAATGAGATTAAAAGTAAAGAGCCGCGTTTCAACGGAAGGCAGACCGTCATCCGATTGGATAGCGGCGTACAGCTGAT
CAAACTGAATGGAAGCAAGGATGAGGTCGTCATTTTTGGAAACAACGGCAACAACGGCACTTTCGGCATTGTTAAGGAAG
CGAACGTCAATCTTGAAGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAA
TTTAAATTAATTAACCAAAAACCAGACAGATACAGCCAAAGATACCGCATCCGCGAAAACGGCAATCGCGATTTGGGCGA
CATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACGACGGGATGGTGCATATCTTCAAAA
AAACCGGCACGGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGTACGATGGAGCGTAAGGATATTGAAGGC
AATGACTCCGACCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGG
CTTTGTCTTGCGTCAAGTTAACTTAAACGGACAAGACCGCGTGTTTATGTTCGGCGCAATGGGCCTTGGCGGCAGAGGCG
CATACGCCTTGGATTTAAGCAAAATCAACGAAAATTATCCAGCCGCCGCTCCCCTGTTTGATGTCAAAAATGGCGATAAA
AACGGCAAAAACGGCAAAAACGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAA
AACCCGCAGCGGCAAATACGCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAAGATATTGGCAGCGGCGATAATAAAACCG
CGCTGTATGTATATGATTTGAACAACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAAGGCGGGCTT
TCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTA
CCGCTTTGATTTGAGCAATTCCGATCCTAATAAATGGTCTGTAAGGACTATTTTCGAAGGCACAAAACCGATTACCTCCG
CGCCCGCCGTTTCCCGACTGAAAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGACCGAAGATGATGTACTC
GATACGAAAGAACAATATATTTACGGTATCTTTGACGACGATAAGGCGGCGAATAATGTAAATGCAAGCCGCGGCGTTTT
GGGGAGCGGGCTGCTCGAGCAACACCTTACTCAGGAAAATAAAACATTATTCCTGAACAAGAGATCCGACGGTTCGGGCA
GCAAGGGCTGGGCGGTGAAATTGACAGGCGGACGGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTA
ACCATCCGCAAATATAAAGACGACGGCTGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATT
GACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATACGGCTGTCGCACAATATTCCGGCCATAAGAAAACCGCCG
GCGGCAAGTCCGTCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCG
GTTAATGTGCGTTATCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTAT
AGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATT
TGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (505-846)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.753	100	0.742