Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SP670_RS05450 Genome accession   NC_014498
Coordinates   1025008..1025472 (+) Length   154 a.a.
NCBI ID   WP_001135786.1    Uniprot ID   -
Organism   Streptococcus pneumoniae 670-6B     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1020008..1030472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SP670_RS14620 - 1022140..1022214 (+) 75 Protein_1042 dihydroxyacetone kinase subunit L -
  SP670_RS05430 (SP670_1101) - 1022214..1022426 (+) 213 Protein_1043 PTS mannose family transporter subunit IIA -
  SP670_RS05435 (SP670_1102) - 1022834..1023547 (+) 714 WP_000499438.1 YjjG family noncanonical pyrimidine nucleotidase -
  SP670_RS05440 (SP670_1103) - 1023605..1024207 (+) 603 WP_001811694.1 hypothetical protein -
  SP670_RS05445 (SP670_1104) - 1024345..1024998 (+) 654 WP_000401326.1 uracil-DNA glycosylase -
  SP670_RS05450 (SP670_1105) mutX 1025008..1025472 (+) 465 WP_001135786.1 8-oxo-dGTP diphosphatase Machinery gene
  SP670_RS05455 (SP670_1106) - 1025485..1026753 (+) 1269 WP_000924490.1 dihydroorotase -
  SP670_RS05460 - 1026767..1027027 (+) 261 WP_001105925.1 hypothetical protein -
  SP670_RS05465 (SP670_1107) pdrM 1027038..1028399 (+) 1362 WP_000278537.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  SP670_RS05470 (SP670_1108) - 1028553..1029521 (+) 969 WP_000105361.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17811.22 Da        Isoelectric Point: 4.3273

>NTDB_id=32818 SP670_RS05450 WP_001135786.1 1025008..1025472(+) (mutX) [Streptococcus pneumoniae 670-6B]
MPQLATICYIDNGKELLMLHRNKKPNDVHKGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=32818 SP670_RS05450 WP_001135786.1 1025008..1025472(+) (mutX) [Streptococcus pneumoniae 670-6B]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATAAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.052

100

0.981

Multiple sequence alignment