Detailed information
Bioinformatically predicted
Overview
| Name | sbcE | Type | Machinery gene |
| Locus tag | FOG69_RS04335 | Genome accession | NZ_CP041693 |
| Coordinates | 862686..865568 (+) | Length | 960 a.a. |
| NCBI ID | WP_014469994.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain H | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 857686..870568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOG69_RS04310 (FOG69_04310) | - | 858122..858889 (+) | 768 | WP_014469991.1 | enoyl-CoA hydratase | - |
| FOG69_RS04315 (FOG69_04315) | - | 858914..859099 (-) | 186 | WP_014469992.1 | YhzD family protein | - |
| FOG69_RS04320 (FOG69_04320) | - | 859205..860101 (+) | 897 | WP_013351698.1 | ABC transporter ATP-binding protein | - |
| FOG69_RS04325 (FOG69_04325) | - | 860094..861353 (+) | 1260 | WP_013351699.1 | ABC transporter permease | - |
| FOG69_RS04330 (FOG69_04330) | - | 861466..862689 (+) | 1224 | WP_014469993.1 | DNA repair exonuclease | - |
| FOG69_RS04335 (FOG69_04335) | sbcE | 862686..865568 (+) | 2883 | WP_014469994.1 | AAA family ATPase | Machinery gene |
| FOG69_RS04340 (FOG69_04340) | yhaM | 865642..866586 (+) | 945 | WP_014469995.1 | 3'-5' exoribonuclease YhaM | - |
| FOG69_RS04345 (FOG69_04345) | - | 866702..866929 (+) | 228 | WP_013351703.1 | sporulation YhaL family protein | - |
| FOG69_RS04350 (FOG69_04350) | - | 866969..867826 (-) | 858 | WP_014469996.1 | peptidylprolyl isomerase | - |
| FOG69_RS04355 (FOG69_04355) | - | 867985..868071 (+) | 87 | WP_016938346.1 | YjcZ family sporulation protein | - |
| FOG69_RS04360 (FOG69_04360) | yhzE2 | 868195..868281 (+) | 87 | WP_013351705.1 | sporulation protein YhzE2 | - |
| FOG69_RS04365 (FOG69_04365) | - | 868338..868556 (-) | 219 | WP_003155245.1 | hypothetical protein | - |
| FOG69_RS04370 (FOG69_04370) | - | 868617..869147 (-) | 531 | WP_013351706.1 | DUF3267 domain-containing protein | - |
| FOG69_RS04380 (FOG69_04380) | - | 869358..869699 (+) | 342 | WP_003155243.1 | YhaI family protein | - |
| FOG69_RS04385 (FOG69_04385) | - | 869696..870307 (-) | 612 | WP_014469997.1 | HTH-type transcriptional regulator Hpr | - |
Sequence
Protein
Download Length: 960 a.a. Molecular weight: 110102.10 Da Isoelectric Point: 7.0395
>NTDB_id=328153 FOG69_RS04335 WP_014469994.1 862686..865568(+) (sbcE) [Bacillus amyloliquefaciens strain H]
MKITALYIYQYGKFSNRSFQLSDSPVQVIYGLNEAGKTTLMSFIKSVLFGFPKSKKYEPKTGGVYGGVVELNHDDYGAVK
IERTKGAAEKVRVYTASGEIKDGKWLKQLLSDTDRALYEAIYSFDVFGLQEIQAFNRDKIGEFLLFSSLFGSEAAAKLDG
RLAKELERMYKPNGRNPRLNQELDTLKRLSAKLKQAETAEAGYHSLLEEKKSAGGRLQDAKAQLKDITEEIKTVKAAIEA
KPLADKKTALESELSSYPEAAEQFPKDGMHQLEKYESHLHPKAARLEGLRAKAAEIKRQADLLSPNEDMLQKERQLQELS
GEQHMYESRGEQLAAIQSQMRQTSARVSSGLQQLGRHEEDDILSLNTDYEYEWQLQEAVQSAGQARERKTQLDSLFEQAR
LELEDAERKHAVTAENVLEPAVRKEKEAALQAYKQTADTEGNEWQAHLRQLEKQRAKQKKLFLGTGILFIAIFVMLKEWL
PAALFTGALMLYVLTGMQKALPSERSRPGHKKQKPLISKEEADLLQEELWRDGQHRQQLIADQAVLEQKEAAYERVIRQY
EEWEAEMAPSEKKTEHFMKELGFSGSPSHLLDAYHVMKDVKKEILTKHELTIEAGRLQKLQRAFEERVKKLSPSDGRELS
VKERLHFLLQQAERAREDAKRKQALETDLLHTQEQIRELNEEVHYYEQQVKQLFTEAGAKNREHFCELGRLNESRRETER
KLCEIKTHLSGKGGKQLEPYMSRTVPELEHTAVQKEQEKETLEEKIAHLREQIALLTVKQEQLESSGLVSDLKQQTEMQK
ERVKKTAKEWAALQTVRHIIREKMERHKKVTLPRLLETAGALYGPLTDGRYQKLYFSEADDSIMVMQKDGTVFSASELSQ
AACEQLYAAIRFALASERESAVSLPFLLDDSFVHFDRERLQRLFDVLNQLSEGGRQILYFTCHEHVSRSFHSGQVMRLLS
MKITALYIYQYGKFSNRSFQLSDSPVQVIYGLNEAGKTTLMSFIKSVLFGFPKSKKYEPKTGGVYGGVVELNHDDYGAVK
IERTKGAAEKVRVYTASGEIKDGKWLKQLLSDTDRALYEAIYSFDVFGLQEIQAFNRDKIGEFLLFSSLFGSEAAAKLDG
RLAKELERMYKPNGRNPRLNQELDTLKRLSAKLKQAETAEAGYHSLLEEKKSAGGRLQDAKAQLKDITEEIKTVKAAIEA
KPLADKKTALESELSSYPEAAEQFPKDGMHQLEKYESHLHPKAARLEGLRAKAAEIKRQADLLSPNEDMLQKERQLQELS
GEQHMYESRGEQLAAIQSQMRQTSARVSSGLQQLGRHEEDDILSLNTDYEYEWQLQEAVQSAGQARERKTQLDSLFEQAR
LELEDAERKHAVTAENVLEPAVRKEKEAALQAYKQTADTEGNEWQAHLRQLEKQRAKQKKLFLGTGILFIAIFVMLKEWL
PAALFTGALMLYVLTGMQKALPSERSRPGHKKQKPLISKEEADLLQEELWRDGQHRQQLIADQAVLEQKEAAYERVIRQY
EEWEAEMAPSEKKTEHFMKELGFSGSPSHLLDAYHVMKDVKKEILTKHELTIEAGRLQKLQRAFEERVKKLSPSDGRELS
VKERLHFLLQQAERAREDAKRKQALETDLLHTQEQIRELNEEVHYYEQQVKQLFTEAGAKNREHFCELGRLNESRRETER
KLCEIKTHLSGKGGKQLEPYMSRTVPELEHTAVQKEQEKETLEEKIAHLREQIALLTVKQEQLESSGLVSDLKQQTEMQK
ERVKKTAKEWAALQTVRHIIREKMERHKKVTLPRLLETAGALYGPLTDGRYQKLYFSEADDSIMVMQKDGTVFSASELSQ
AACEQLYAAIRFALASERESAVSLPFLLDDSFVHFDRERLQRLFDVLNQLSEGGRQILYFTCHEHVSRSFHSGQVMRLLS
Nucleotide
Download Length: 2883 bp
>NTDB_id=328153 FOG69_RS04335 WP_014469994.1 862686..865568(+) (sbcE) [Bacillus amyloliquefaciens strain H]
ATGAAAATAACGGCGCTCTATATTTACCAGTATGGAAAATTTTCCAATCGAAGCTTTCAGCTGTCGGATTCCCCCGTACA
AGTCATCTACGGATTAAATGAAGCGGGCAAAACGACATTGATGTCCTTTATCAAAAGCGTCCTGTTCGGTTTTCCGAAAT
CAAAAAAATACGAACCGAAAACCGGCGGGGTTTACGGCGGCGTTGTGGAACTGAATCATGACGATTACGGTGCTGTCAAA
ATCGAACGGACAAAAGGGGCTGCCGAAAAAGTCAGAGTGTACACGGCTTCAGGCGAAATTAAGGACGGAAAATGGCTCAA
ACAGCTGCTTTCCGATACAGATCGTGCGCTGTACGAAGCGATCTATTCGTTTGATGTATTCGGACTGCAGGAGATTCAAG
CCTTTAACCGAGACAAAATCGGGGAGTTTCTCCTGTTTTCCAGCTTATTCGGGTCTGAAGCGGCGGCGAAGCTTGACGGC
AGACTGGCGAAAGAACTTGAAAGAATGTATAAGCCGAACGGGCGGAACCCCCGCTTAAATCAGGAATTGGATACATTAAA
GCGGCTCAGCGCCAAGCTCAAACAGGCGGAAACTGCGGAAGCGGGCTATCACAGCCTCCTGGAAGAGAAAAAAAGCGCCG
GCGGCCGTTTGCAGGATGCCAAAGCGCAATTGAAAGATATAACTGAAGAAATCAAAACAGTAAAAGCGGCGATAGAAGCA
AAGCCGCTTGCGGACAAAAAAACAGCGCTGGAAAGCGAACTTTCTTCTTACCCGGAAGCAGCGGAGCAATTCCCGAAGGA
CGGAATGCATCAGCTGGAAAAATACGAATCGCATCTCCATCCGAAAGCGGCCCGGCTTGAGGGGCTTCGGGCAAAAGCGG
CTGAAATCAAACGGCAGGCTGATCTGCTCTCTCCAAATGAGGACATGTTACAAAAAGAGCGGCAGCTGCAGGAGCTTTCC
GGCGAGCAGCATATGTACGAATCACGCGGCGAACAGCTTGCCGCCATCCAATCACAGATGCGGCAGACATCAGCCCGTGT
TTCTTCAGGATTACAGCAGCTCGGCAGACATGAGGAAGACGACATTCTTTCGCTGAACACCGATTATGAATATGAATGGC
AGCTGCAAGAAGCCGTTCAGAGCGCCGGACAGGCCAGAGAAAGAAAAACACAGCTCGACTCTCTATTTGAACAAGCGCGG
CTGGAGCTGGAAGACGCTGAACGAAAACATGCCGTGACGGCAGAAAACGTCTTGGAACCCGCTGTCAGAAAAGAAAAAGA
AGCCGCCTTACAAGCATATAAACAAACGGCTGATACTGAAGGAAACGAATGGCAGGCTCATCTCCGGCAGCTGGAAAAAC
AGCGCGCCAAACAAAAAAAGCTCTTTCTCGGTACGGGCATTCTGTTCATTGCGATTTTCGTTATGTTAAAGGAATGGCTG
CCCGCCGCCCTTTTTACCGGCGCTCTGATGCTGTACGTGCTGACTGGCATGCAAAAGGCGCTGCCGTCTGAAAGAAGCCG
GCCCGGTCACAAAAAGCAGAAGCCCCTGATCTCAAAAGAAGAGGCTGATCTTCTGCAGGAAGAGCTATGGCGTGACGGCC
AGCATCGGCAGCAGCTGATTGCGGATCAAGCGGTGCTTGAACAGAAAGAAGCGGCATATGAAAGAGTCATCCGCCAATAT
GAAGAATGGGAGGCCGAAATGGCGCCCTCTGAAAAAAAGACGGAACATTTTATGAAGGAACTGGGGTTTTCGGGCAGCCC
GTCCCATCTCCTCGACGCATATCATGTGATGAAAGATGTCAAAAAAGAAATCCTTACCAAGCATGAGCTGACCATTGAAG
CGGGGCGGCTGCAAAAACTGCAACGAGCATTTGAGGAACGGGTCAAAAAGCTGAGTCCTTCAGACGGCCGGGAGCTGTCC
GTAAAAGAAAGGCTGCACTTTTTGCTGCAGCAGGCAGAACGGGCCCGTGAAGATGCAAAACGAAAACAGGCGCTCGAAAC
AGACCTGCTGCATACCCAAGAGCAAATCCGTGAATTAAACGAAGAAGTTCATTACTACGAACAGCAGGTCAAACAGCTTT
TTACAGAGGCAGGGGCAAAAAACCGTGAACACTTTTGTGAACTTGGCAGGCTGAATGAAAGCCGCCGGGAAACAGAGAGG
AAGCTGTGCGAAATCAAAACGCACTTATCCGGCAAGGGCGGCAAACAGCTGGAGCCGTACATGAGCCGCACAGTGCCCGA
ACTTGAACATACAGCCGTTCAGAAAGAACAAGAGAAAGAAACACTTGAGGAAAAAATCGCCCATCTCCGTGAGCAGATCG
CTTTATTAACGGTGAAACAAGAACAGCTGGAGTCCTCGGGGCTGGTATCCGATTTAAAACAGCAGACAGAAATGCAGAAA
GAACGCGTTAAAAAAACAGCTAAAGAGTGGGCCGCATTGCAGACGGTCAGACACATCATCAGAGAAAAAATGGAGCGGCA
TAAAAAAGTCACGCTTCCCCGTCTGTTGGAAACCGCAGGTGCATTGTACGGACCGCTTACGGACGGACGCTATCAGAAAT
TGTATTTCTCTGAAGCTGATGACTCCATTATGGTCATGCAGAAAGACGGCACGGTTTTTTCTGCAAGCGAGCTGTCACAG
GCGGCATGCGAGCAGCTTTATGCGGCGATCCGTTTTGCCCTTGCATCAGAACGGGAATCTGCGGTATCACTTCCGTTTTT
ACTTGATGACAGTTTTGTTCATTTTGACAGGGAGCGGCTGCAGCGGCTGTTTGATGTGCTGAATCAGCTTTCAGAAGGCG
GCCGTCAGATTCTTTATTTCACCTGCCATGAGCATGTCAGCCGGTCATTTCACAGCGGGCAAGTCATGCGGCTCCTGTCA
TAA
ATGAAAATAACGGCGCTCTATATTTACCAGTATGGAAAATTTTCCAATCGAAGCTTTCAGCTGTCGGATTCCCCCGTACA
AGTCATCTACGGATTAAATGAAGCGGGCAAAACGACATTGATGTCCTTTATCAAAAGCGTCCTGTTCGGTTTTCCGAAAT
CAAAAAAATACGAACCGAAAACCGGCGGGGTTTACGGCGGCGTTGTGGAACTGAATCATGACGATTACGGTGCTGTCAAA
ATCGAACGGACAAAAGGGGCTGCCGAAAAAGTCAGAGTGTACACGGCTTCAGGCGAAATTAAGGACGGAAAATGGCTCAA
ACAGCTGCTTTCCGATACAGATCGTGCGCTGTACGAAGCGATCTATTCGTTTGATGTATTCGGACTGCAGGAGATTCAAG
CCTTTAACCGAGACAAAATCGGGGAGTTTCTCCTGTTTTCCAGCTTATTCGGGTCTGAAGCGGCGGCGAAGCTTGACGGC
AGACTGGCGAAAGAACTTGAAAGAATGTATAAGCCGAACGGGCGGAACCCCCGCTTAAATCAGGAATTGGATACATTAAA
GCGGCTCAGCGCCAAGCTCAAACAGGCGGAAACTGCGGAAGCGGGCTATCACAGCCTCCTGGAAGAGAAAAAAAGCGCCG
GCGGCCGTTTGCAGGATGCCAAAGCGCAATTGAAAGATATAACTGAAGAAATCAAAACAGTAAAAGCGGCGATAGAAGCA
AAGCCGCTTGCGGACAAAAAAACAGCGCTGGAAAGCGAACTTTCTTCTTACCCGGAAGCAGCGGAGCAATTCCCGAAGGA
CGGAATGCATCAGCTGGAAAAATACGAATCGCATCTCCATCCGAAAGCGGCCCGGCTTGAGGGGCTTCGGGCAAAAGCGG
CTGAAATCAAACGGCAGGCTGATCTGCTCTCTCCAAATGAGGACATGTTACAAAAAGAGCGGCAGCTGCAGGAGCTTTCC
GGCGAGCAGCATATGTACGAATCACGCGGCGAACAGCTTGCCGCCATCCAATCACAGATGCGGCAGACATCAGCCCGTGT
TTCTTCAGGATTACAGCAGCTCGGCAGACATGAGGAAGACGACATTCTTTCGCTGAACACCGATTATGAATATGAATGGC
AGCTGCAAGAAGCCGTTCAGAGCGCCGGACAGGCCAGAGAAAGAAAAACACAGCTCGACTCTCTATTTGAACAAGCGCGG
CTGGAGCTGGAAGACGCTGAACGAAAACATGCCGTGACGGCAGAAAACGTCTTGGAACCCGCTGTCAGAAAAGAAAAAGA
AGCCGCCTTACAAGCATATAAACAAACGGCTGATACTGAAGGAAACGAATGGCAGGCTCATCTCCGGCAGCTGGAAAAAC
AGCGCGCCAAACAAAAAAAGCTCTTTCTCGGTACGGGCATTCTGTTCATTGCGATTTTCGTTATGTTAAAGGAATGGCTG
CCCGCCGCCCTTTTTACCGGCGCTCTGATGCTGTACGTGCTGACTGGCATGCAAAAGGCGCTGCCGTCTGAAAGAAGCCG
GCCCGGTCACAAAAAGCAGAAGCCCCTGATCTCAAAAGAAGAGGCTGATCTTCTGCAGGAAGAGCTATGGCGTGACGGCC
AGCATCGGCAGCAGCTGATTGCGGATCAAGCGGTGCTTGAACAGAAAGAAGCGGCATATGAAAGAGTCATCCGCCAATAT
GAAGAATGGGAGGCCGAAATGGCGCCCTCTGAAAAAAAGACGGAACATTTTATGAAGGAACTGGGGTTTTCGGGCAGCCC
GTCCCATCTCCTCGACGCATATCATGTGATGAAAGATGTCAAAAAAGAAATCCTTACCAAGCATGAGCTGACCATTGAAG
CGGGGCGGCTGCAAAAACTGCAACGAGCATTTGAGGAACGGGTCAAAAAGCTGAGTCCTTCAGACGGCCGGGAGCTGTCC
GTAAAAGAAAGGCTGCACTTTTTGCTGCAGCAGGCAGAACGGGCCCGTGAAGATGCAAAACGAAAACAGGCGCTCGAAAC
AGACCTGCTGCATACCCAAGAGCAAATCCGTGAATTAAACGAAGAAGTTCATTACTACGAACAGCAGGTCAAACAGCTTT
TTACAGAGGCAGGGGCAAAAAACCGTGAACACTTTTGTGAACTTGGCAGGCTGAATGAAAGCCGCCGGGAAACAGAGAGG
AAGCTGTGCGAAATCAAAACGCACTTATCCGGCAAGGGCGGCAAACAGCTGGAGCCGTACATGAGCCGCACAGTGCCCGA
ACTTGAACATACAGCCGTTCAGAAAGAACAAGAGAAAGAAACACTTGAGGAAAAAATCGCCCATCTCCGTGAGCAGATCG
CTTTATTAACGGTGAAACAAGAACAGCTGGAGTCCTCGGGGCTGGTATCCGATTTAAAACAGCAGACAGAAATGCAGAAA
GAACGCGTTAAAAAAACAGCTAAAGAGTGGGCCGCATTGCAGACGGTCAGACACATCATCAGAGAAAAAATGGAGCGGCA
TAAAAAAGTCACGCTTCCCCGTCTGTTGGAAACCGCAGGTGCATTGTACGGACCGCTTACGGACGGACGCTATCAGAAAT
TGTATTTCTCTGAAGCTGATGACTCCATTATGGTCATGCAGAAAGACGGCACGGTTTTTTCTGCAAGCGAGCTGTCACAG
GCGGCATGCGAGCAGCTTTATGCGGCGATCCGTTTTGCCCTTGCATCAGAACGGGAATCTGCGGTATCACTTCCGTTTTT
ACTTGATGACAGTTTTGTTCATTTTGACAGGGAGCGGCTGCAGCGGCTGTTTGATGTGCTGAATCAGCTTTCAGAAGGCG
GCCGTCAGATTCTTTATTTCACCTGCCATGAGCATGTCAGCCGGTCATTTCACAGCGGGCAAGTCATGCGGCTCCTGTCA
TAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sbcE | Bacillus subtilis subsp. subtilis str. 168 |
58.221 |
100 |
0.586 |