Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | FGF55_RS08655 | Genome accession | NZ_CP041691 |
| Coordinates | 1684207..1684569 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain ZJU1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1679207..1689569
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGF55_RS08625 (FGF55_08625) | flgD | 1680110..1680550 (+) | 441 | WP_007409782.1 | flagellar hook assembly protein FlgD | - |
| FGF55_RS08630 (FGF55_08630) | flgG | 1680575..1681351 (+) | 777 | WP_007409783.1 | flagellar basal body rod protein FlgG | - |
| FGF55_RS08635 (FGF55_08635) | - | 1681391..1681606 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| FGF55_RS08640 (FGF55_08640) | fliL | 1681603..1682022 (+) | 420 | WP_014417773.1 | flagellar basal body-associated protein FliL | - |
| FGF55_RS08645 (FGF55_08645) | fliM | 1682056..1683054 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| FGF55_RS08650 (FGF55_08650) | fliY | 1683044..1684180 (+) | 1137 | WP_014417774.1 | flagellar motor switch phosphatase FliY | - |
| FGF55_RS08655 (FGF55_08655) | pilH | 1684207..1684569 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| FGF55_RS08660 (FGF55_08660) | fliZ | 1684584..1685237 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| FGF55_RS08665 (FGF55_08665) | fliP | 1685230..1685895 (+) | 666 | WP_007409786.1 | flagellar type III secretion system pore protein FliP | - |
| FGF55_RS08670 (FGF55_08670) | fliQ | 1685910..1686179 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| FGF55_RS08675 (FGF55_08675) | fliR | 1686186..1686965 (+) | 780 | WP_014417775.1 | flagellar biosynthetic protein FliR | - |
| FGF55_RS08680 (FGF55_08680) | flhB | 1686965..1688044 (+) | 1080 | WP_014417776.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=328041 FGF55_RS08655 WP_003154238.1 1684207..1684569(+) (pilH) [Bacillus amyloliquefaciens strain ZJU1]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=328041 FGF55_RS08655 WP_003154238.1 1684207..1684569(+) (pilH) [Bacillus amyloliquefaciens strain ZJU1]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTCGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTCGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |