Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | EHF44_RS03970 | Genome accession | NZ_CP033969 |
| Coordinates | 496017..497288 (+) | Length | 423 a.a. |
| NCBI ID | WP_124682547.1 | Uniprot ID | A0A3G8GWK3 |
| Organism | Cupriavidus pauculus strain FDAARGOS_614 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 491017..502288
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHF44_RS03945 (EHF44_03945) | - | 491276..491536 (-) | 261 | WP_124682543.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| EHF44_RS03950 (EHF44_03950) | coaD | 491604..492089 (-) | 486 | WP_124682544.1 | pantetheine-phosphate adenylyltransferase | - |
| EHF44_RS03955 (EHF44_03955) | rsmD | 492327..492968 (-) | 642 | WP_172966005.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| EHF44_RS03960 (EHF44_03960) | - | 493042..494406 (-) | 1365 | WP_124682545.1 | pitrilysin family protein | - |
| EHF44_RS03965 (EHF44_03965) | - | 494421..495956 (-) | 1536 | WP_124682546.1 | pitrilysin family protein | - |
| EHF44_RS03970 (EHF44_03970) | pilA | 496017..497288 (+) | 1272 | WP_124682547.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| EHF44_RS03975 (EHF44_03975) | - | 497405..497815 (-) | 411 | WP_124682548.1 | hypothetical protein | - |
| EHF44_RS03980 (EHF44_03980) | maiA | 497938..498582 (-) | 645 | WP_216643974.1 | maleylacetoacetate isomerase | - |
| EHF44_RS03985 (EHF44_03985) | - | 498590..499291 (-) | 702 | WP_124682550.1 | fumarylacetoacetate hydrolase family protein | - |
| EHF44_RS03990 (EHF44_03990) | - | 499469..500104 (+) | 636 | WP_124682551.1 | ANTAR domain-containing response regulator | - |
| EHF44_RS03995 (EHF44_03995) | - | 500519..501829 (+) | 1311 | WP_124682552.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 423 a.a. Molecular weight: 44865.47 Da Isoelectric Point: 6.1750
>NTDB_id=327512 EHF44_RS03970 WP_124682547.1 496017..497288(+) (pilA) [Cupriavidus pauculus strain FDAARGOS_614]
MFSFWKKRKAEPAPAPVEPPVAAPEPVSAPAQAPVPTPAPAPAPLPAPAPVPVPVPVPVPVPVPVPMPMPAPAPAPQPAP
SPVPVPVPVPVPAQVPPPPPAPVAYEPPVVEELELVPPPAPTPEAKRGWMTRLKAGLSKTSRNIGVLFVGVKVDEALFEE
LETALLMSDAGVEATEYLLDQLRRRVKNDRIETAEGVKTALKDLLVELLKPLEKTMELGREQPLVMMIAGVNGAGKTTSI
GKLCKHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQL
HLMEELKKVKRVVGKAMPTAPHECLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFI
GVGEKVEDLQPFRAEEFAEALLG
MFSFWKKRKAEPAPAPVEPPVAAPEPVSAPAQAPVPTPAPAPAPLPAPAPVPVPVPVPVPVPVPVPMPMPAPAPAPQPAP
SPVPVPVPVPVPAQVPPPPPAPVAYEPPVVEELELVPPPAPTPEAKRGWMTRLKAGLSKTSRNIGVLFVGVKVDEALFEE
LETALLMSDAGVEATEYLLDQLRRRVKNDRIETAEGVKTALKDLLVELLKPLEKTMELGREQPLVMMIAGVNGAGKTTSI
GKLCKHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQL
HLMEELKKVKRVVGKAMPTAPHECLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFI
GVGEKVEDLQPFRAEEFAEALLG
Nucleotide
Download Length: 1272 bp
>NTDB_id=327512 EHF44_RS03970 WP_124682547.1 496017..497288(+) (pilA) [Cupriavidus pauculus strain FDAARGOS_614]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCGGCTCCCGCGCCCGTCGAGCCGCCGGTTGCCGCGCCGGAACCCGT
GTCCGCGCCCGCCCAGGCTCCGGTCCCGACGCCCGCCCCCGCGCCGGCCCCGCTTCCCGCGCCCGCTCCGGTGCCGGTGC
CAGTCCCCGTTCCGGTGCCTGTGCCTGTGCCTGTGCCGATGCCGATGCCGGCGCCGGCCCCCGCACCCCAGCCGGCGCCA
AGCCCGGTGCCGGTTCCCGTCCCGGTCCCGGTGCCCGCGCAGGTCCCGCCGCCCCCGCCCGCCCCGGTCGCCTACGAGCC
GCCAGTGGTCGAGGAACTCGAACTGGTTCCCCCGCCCGCGCCCACGCCCGAGGCCAAGCGCGGCTGGATGACGCGCCTGA
AGGCGGGCCTGTCGAAGACAAGCCGCAACATCGGCGTGCTGTTCGTCGGCGTGAAGGTCGACGAGGCCCTGTTCGAGGAA
CTGGAAACCGCGCTGCTGATGTCCGACGCCGGCGTGGAGGCCACGGAATACCTGCTCGACCAGTTGCGCCGCCGCGTCAA
GAACGACCGCATCGAGACGGCCGAAGGCGTCAAGACCGCGCTGAAGGACCTGCTGGTGGAGCTGCTCAAGCCGCTGGAAA
AGACCATGGAACTGGGCCGCGAGCAGCCGCTGGTGATGATGATCGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATC
GGCAAGCTCTGCAAGCACTTCCAGTCGTACCACCAGTCCGTGCTGCTGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCG
CGAGCAGCTGACGATCTGGGGCGAACGCAACAACGTGACCGTCGTCGCCCAGGAAAGCGGCGACCCGGCTGCCGTGATCT
TCGACGCCGTGAACGCCGCCCGCGCCCGCAAGATCGACATCGTGATGGCCGACACGGCCGGCCGCCTGCCTACGCAGTTG
CACCTGATGGAAGAACTCAAGAAGGTCAAGCGCGTGGTCGGCAAGGCGATGCCTACCGCCCCGCACGAATGCCTGCTGGT
GATCGACGCCAACACGGGGCAGAACGCGCTGGCCCAGACCCGCGCATTCGACGACGCCCTGGGCCTGACCGGCCTGATCG
TGACCAAGCTGGACGGCACGGCCAAGGGCGGCATCCTGGCAGCCATCGCCCGCCAGCGCCCGATCCCCGTCTACTTCATC
GGCGTGGGCGAAAAGGTGGAAGACCTGCAGCCCTTCCGGGCCGAGGAGTTCGCGGAAGCGTTGCTGGGGTGA
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCGGCTCCCGCGCCCGTCGAGCCGCCGGTTGCCGCGCCGGAACCCGT
GTCCGCGCCCGCCCAGGCTCCGGTCCCGACGCCCGCCCCCGCGCCGGCCCCGCTTCCCGCGCCCGCTCCGGTGCCGGTGC
CAGTCCCCGTTCCGGTGCCTGTGCCTGTGCCTGTGCCGATGCCGATGCCGGCGCCGGCCCCCGCACCCCAGCCGGCGCCA
AGCCCGGTGCCGGTTCCCGTCCCGGTCCCGGTGCCCGCGCAGGTCCCGCCGCCCCCGCCCGCCCCGGTCGCCTACGAGCC
GCCAGTGGTCGAGGAACTCGAACTGGTTCCCCCGCCCGCGCCCACGCCCGAGGCCAAGCGCGGCTGGATGACGCGCCTGA
AGGCGGGCCTGTCGAAGACAAGCCGCAACATCGGCGTGCTGTTCGTCGGCGTGAAGGTCGACGAGGCCCTGTTCGAGGAA
CTGGAAACCGCGCTGCTGATGTCCGACGCCGGCGTGGAGGCCACGGAATACCTGCTCGACCAGTTGCGCCGCCGCGTCAA
GAACGACCGCATCGAGACGGCCGAAGGCGTCAAGACCGCGCTGAAGGACCTGCTGGTGGAGCTGCTCAAGCCGCTGGAAA
AGACCATGGAACTGGGCCGCGAGCAGCCGCTGGTGATGATGATCGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATC
GGCAAGCTCTGCAAGCACTTCCAGTCGTACCACCAGTCCGTGCTGCTGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCG
CGAGCAGCTGACGATCTGGGGCGAACGCAACAACGTGACCGTCGTCGCCCAGGAAAGCGGCGACCCGGCTGCCGTGATCT
TCGACGCCGTGAACGCCGCCCGCGCCCGCAAGATCGACATCGTGATGGCCGACACGGCCGGCCGCCTGCCTACGCAGTTG
CACCTGATGGAAGAACTCAAGAAGGTCAAGCGCGTGGTCGGCAAGGCGATGCCTACCGCCCCGCACGAATGCCTGCTGGT
GATCGACGCCAACACGGGGCAGAACGCGCTGGCCCAGACCCGCGCATTCGACGACGCCCTGGGCCTGACCGGCCTGATCG
TGACCAAGCTGGACGGCACGGCCAAGGGCGGCATCCTGGCAGCCATCGCCCGCCAGCGCCCGATCCCCGTCTACTTCATC
GGCGTGGGCGAAAAGGTGGAAGACCTGCAGCCCTTCCGGGCCGAGGAGTTCGCGGAAGCGTTGCTGGGGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
50 |
100 |
0.515 |