Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   EG882_RS21230 Genome accession   NZ_CP033967
Coordinates   284023..284187 (-) Length   54 a.a.
NCBI ID   WP_269461319.1    Uniprot ID   -
Organism   Bacillus velezensis strain 1B-23     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 279023..289187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EG882_RS21230 comS 284023..284187 (-) 165 WP_269461319.1 competence protein ComS Regulator
  EG882_RS21235 srfAB 284252..287296 (-) 3045 Protein_300 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6184.17 Da        Isoelectric Point: 12.0559

>NTDB_id=327507 EG882_RS21230 WP_269461319.1 284023..284187(-) (comS) [Bacillus velezensis strain 1B-23]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRQARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=327507 EG882_RS21230 WP_269461319.1 284023..284187(-) (comS) [Bacillus velezensis strain 1B-23]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCAAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

63.636

81.481

0.519

Multiple sequence alignment