Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EG882_RS17055 Genome accession   NZ_CP033967
Coordinates   3388639..3389103 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain 1B-23     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3383639..3394103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EG882_RS21360 - 3384146..3384642 (-) 497 Protein_3282 hypothetical protein -
  EG882_RS17035 (EG882_17035) fadH 3384807..3385571 (-) 765 WP_122503878.1 2,4-dienoyl-CoA reductase -
  EG882_RS17040 (EG882_17040) - 3385716..3386579 (+) 864 WP_085341949.1 metallophosphoesterase -
  EG882_RS17045 (EG882_17045) - 3386654..3387148 (+) 495 WP_095284082.1 L,D-transpeptidase family protein -
  EG882_RS17050 (EG882_17050) - 3387224..3388516 (+) 1293 WP_007611093.1 MFS transporter -
  EG882_RS17055 (EG882_17055) kre 3388639..3389103 (+) 465 WP_003154622.1 YkyB family protein Regulator
  EG882_RS17060 (EG882_17060) cheV 3389146..3390057 (-) 912 WP_043021221.1 chemotaxis protein CheV -
  EG882_RS21095 - 3390246..3390407 (+) 162 WP_007409608.1 hypothetical protein -
  EG882_RS17070 (EG882_17070) - 3390608..3391777 (+) 1170 WP_007611083.1 aminotransferase A -
  EG882_RS17075 (EG882_17075) - 3391802..3393622 (-) 1821 WP_043021222.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=327490 EG882_RS17055 WP_003154622.1 3388639..3389103(+) (kre) [Bacillus velezensis strain 1B-23]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=327490 EG882_RS17055 WP_003154622.1 3388639..3389103(+) (kre) [Bacillus velezensis strain 1B-23]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment