Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EG882_RS11590 Genome accession   NZ_CP033967
Coordinates   2189435..2190235 (+) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain 1B-23     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2184435..2195235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EG882_RS11570 (EG882_11570) - 2184557..2185402 (+) 846 WP_007612503.1 TlyA family RNA methyltransferase -
  EG882_RS11575 (EG882_11575) argR 2185499..2185948 (+) 450 WP_003153173.1 transcriptional regulator ArgR -
  EG882_RS11580 (EG882_11580) recN 2185980..2187710 (+) 1731 WP_007408359.1 DNA repair protein RecN Machinery gene
  EG882_RS11585 (EG882_11585) spoIVB 2187874..2189154 (+) 1281 WP_007408360.1 SpoIVB peptidase -
  EG882_RS11590 (EG882_11590) spo0A 2189435..2190235 (+) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  EG882_RS11595 (EG882_11595) alr 2190384..2191565 (-) 1182 WP_012117960.1 alanine racemase -
  EG882_RS11600 (EG882_11600) - 2191742..2191954 (-) 213 WP_003153181.1 spore germination protein -
  EG882_RS11605 (EG882_11605) - 2192080..2192292 (-) 213 WP_007408362.1 spore germination protein -
  EG882_RS11610 (EG882_11610) - 2192420..2193538 (-) 1119 WP_015240192.1 NADH-dependent flavin oxidoreductase -
  EG882_RS21015 - 2193632..2193769 (-) 138 WP_014470646.1 hypothetical protein -
  EG882_RS11620 (EG882_11620) - 2194066..2194698 (-) 633 WP_007408365.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=327481 EG882_RS11590 WP_003153177.1 2189435..2190235(+) (spo0A) [Bacillus velezensis strain 1B-23]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=327481 EG882_RS11590 WP_003153177.1 2189435..2190235(+) (spo0A) [Bacillus velezensis strain 1B-23]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCAGATGTGCTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCCC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCTGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTCAGC
ATGACAAAAGCAAAGCCAACCAACTCGGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTAGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment