Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   FNV65_RS29820 Genome accession   NZ_CP041612
Coordinates   6604904..6606028 (-) Length   374 a.a.
NCBI ID   WP_054228678.1    Uniprot ID   A0ABU3UNR1
Organism   Streptomyces sp. S1A1-8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6599904..6611028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNV65_RS29795 (FNV65_30265) cseB 6600472..6601176 (-) 705 WP_097285706.1 two-component system response regulator CseB -
  FNV65_RS29800 (FNV65_30270) - 6601196..6601816 (-) 621 WP_054228697.1 hypothetical protein -
  FNV65_RS29805 (FNV65_30275) - 6601837..6602376 (-) 540 WP_060898668.1 SigE family RNA polymerase sigma factor -
  FNV65_RS29810 (FNV65_30280) - 6602643..6603566 (-) 924 WP_054228676.1 A/G-specific adenine glycosylase -
  FNV65_RS29815 (FNV65_30285) - 6603903..6604748 (+) 846 WP_143602512.1 hypothetical protein -
  FNV65_RS29820 (FNV65_30290) disA 6604904..6606028 (-) 1125 WP_054228678.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  FNV65_RS29825 (FNV65_30295) radA/sms 6606108..6607517 (-) 1410 WP_054228679.1 DNA repair protein RadA Machinery gene
  FNV65_RS29830 (FNV65_30300) - 6607722..6609521 (+) 1800 WP_143627615.1 hypothetical protein -
  FNV65_RS29835 (FNV65_30305) - 6609567..6610319 (-) 753 WP_060896527.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40091.86 Da        Isoelectric Point: 4.9987

>NTDB_id=327320 FNV65_RS29820 WP_054228678.1 6604904..6606028(-) (disA) [Streptomyces sp. S1A1-8]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVDFTATRLR
ELCKLDGGIVVDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSDLNALAHSELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=327320 FNV65_RS29820 WP_054228678.1 6604904..6606028(-) (disA) [Streptomyces sp. S1A1-8]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCATT
GAGCGCCGTGGCACCTGGCACGGCCCTGCGCGACGGGCTCGAGCGGATCCTCCGCGGGAACACCGGCGGGCTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGACTTCACGGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCGTCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGCTCGTGCC
CGATCCGACGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACGGCGGATCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTGTCCCAGTCGATGCGTCTGATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGTCGGCGGTGGCGCAGCGCTTGGAGATGGTGCGGCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGTTGGGCACGGACGGGCGGCTGCTCGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGGGAGCTCGTGGTCCGGGACTACGTGCCGGAGCCGACCGCGAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTCCGACCTGAACGCCCTGGCCCACTCCGAGCTGCTCGAACTGCCCACGGTGGCGAGAGCCTTGGGTTACACCG
GCTCCCCCGAGGCGCTCGACTCGGCGGTCTCCCCGCGCGGCTTCCGCCTCCTCGCCAAGGTCCCGCGTCTGCCCGGCGCG
ATCATCGACCGCCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTCCTCGCCGCGAGCGTGGACGACCTTCAGGCGGTCGA
CGGAGTGGGCGAGGCGCGGGCGCGCAGCGTCCGTGAGGGGCTGTCGCGACTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43