Detailed information NTG0327259

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EG352_RS15500
• Genome accession: NZ_CP033930
• Coordinates: 3471431..3472540 (-)
• Length: 369 a.a.
• NCBI ID: WP_061085072.1
• Uniprot ID: -
• Organism: Chryseobacterium indologenes strain H5559
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3466431..3477540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG352_RS15475 (EG352_15605)	-	3467422..3468393 (+)	972	WP_061085075.1	ion channel	-
EG352_RS15480 (EG352_15610)	-	3468394..3468882 (+)	489	WP_027372018.1	YkgJ family cysteine cluster protein	-
EG352_RS15485 (EG352_15615)	-	3469034..3469336 (+)	303	WP_123861807.1	hypothetical protein	-
EG352_RS15490 (EG352_15620)	-	3469381..3469749 (-)	369	WP_061085073.1	iron chaperone	-
EG352_RS15495 (EG352_15625)	gdhA	3469881..3471239 (-)	1359	WP_027372015.1	NADP-specific glutamate dehydrogenase	-
EG352_RS15500 (EG352_15630)	dprA	3471431..3472540 (-)	1110	WP_061085072.1	DNA-processing protein DprA	Machinery gene
EG352_RS15505 (EG352_15635)	-	3472573..3473340 (-)	768	WP_061085071.1	rhomboid family intramembrane serine protease	-
EG352_RS15510 (EG352_15640)	-	3473592..3474521 (+)	930	WP_027372012.1	DUF3078 domain-containing protein	-
EG352_RS15515 (EG352_15645)	-	3474753..3475676 (+)	924	WP_027372011.1	DUF3078 domain-containing protein	-
EG352_RS15520 (EG352_15650)	sufD	3475739..3477046 (-)	1308	WP_027372010.1	Fe-S cluster assembly protein SufD	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41346.23 Da
• Isoelectric Point: 7.4472

>NTDB_id=327259 EG352_RS15500 WP_061085072.1 3471431..3472540(-) (dprA) [Chryseobacterium indologenes strain H5559]
MISEEHLFAIALRECSQIGDINFHKLVRTFGSAQAAWKNAKKNYKKIEGMGYKTVSDIGNEAHLKFAEKELKFCEKNNIQ
IKLRFLNEIPFLLNECTDAPAILYQKGDPDNVLPKVSIVGTRNMTPYGKQFIEDFFEASQSSKYATVSGLALGVDKEVHE
QSIHNKKPTIAVLAHGFQFLYPAKNRRLSEKILDEGGTLLTEFSSSRKPDRENFIQRNRIVAGISPATIVVETGFGGGSV
STASFANDYNREVFALPGKITDRFSQGCNQLIFQNKATAISSIKDLVQMLGFNNPREKIEELFPHSETSIQLSEDQDSIY
HFIKDNPQISLDDLTQGISLPSYKILPIILELELLGKVKSFSGRQFIAI

Nucleotide

• Length: 1110 bp

>NTDB_id=327259 EG352_RS15500 WP_061085072.1 3471431..3472540(-) (dprA) [Chryseobacterium indologenes strain H5559]
ATGATTTCCGAAGAACATCTTTTTGCCATCGCCCTTCGCGAATGCAGCCAGATTGGTGACATCAATTTTCATAAGCTCGT
CCGAACCTTTGGAAGTGCTCAGGCAGCATGGAAAAACGCAAAGAAAAACTATAAAAAAATAGAAGGCATGGGCTACAAAA
CCGTTTCTGACATTGGAAACGAAGCTCATCTGAAATTTGCAGAAAAGGAACTTAAATTTTGCGAAAAAAATAATATTCAA
ATCAAATTAAGGTTCCTTAATGAAATCCCTTTCCTTTTGAACGAATGTACAGATGCTCCTGCTATTTTATATCAAAAAGG
AGATCCTGATAATGTACTCCCCAAAGTAAGTATTGTAGGAACAAGAAATATGACCCCATACGGCAAGCAATTTATTGAAG
ACTTCTTTGAAGCTTCGCAATCCTCAAAATATGCCACCGTCAGTGGGCTTGCGCTGGGAGTTGACAAGGAAGTTCATGAG
CAGTCAATCCACAACAAAAAGCCTACAATTGCAGTTCTTGCGCATGGTTTTCAGTTTTTATATCCTGCAAAAAACAGAAG
ACTTTCAGAAAAAATACTGGACGAGGGAGGCACACTTCTCACGGAATTCAGCTCTTCGAGAAAACCGGACCGGGAAAACT
TTATTCAGAGGAACAGAATTGTTGCGGGAATTTCACCCGCCACTATTGTCGTTGAAACCGGTTTTGGGGGCGGATCTGTA
AGTACCGCGTCCTTTGCCAATGATTACAACAGAGAGGTTTTTGCCCTTCCCGGAAAAATAACAGACCGTTTCAGCCAGGG
ATGTAATCAGTTGATTTTCCAAAATAAAGCCACAGCAATCTCCAGTATAAAAGATCTTGTACAGATGCTTGGTTTTAATA
ATCCGAGAGAAAAAATTGAAGAGCTTTTCCCGCATAGCGAAACATCAATACAATTATCTGAAGATCAGGATTCAATATAT
CATTTCATCAAAGATAATCCGCAGATTTCGCTGGACGATCTGACACAGGGAATTTCGCTCCCTTCCTATAAAATATTACC
GATAATTCTTGAACTGGAGCTTTTAGGGAAAGTAAAATCGTTTTCCGGGAGACAATTTATAGCAATTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.473	98.645	0.518