Detailed information NTG0327232

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EG358_RS02045
• Genome accession: NZ_CP033929
• Coordinates: 415024..416133 (-)
• Length: 369 a.a.
• NCBI ID: WP_076561226.1
• Uniprot ID: A0A381F6N2
• Organism: Chryseobacterium indoltheticum strain ATCC 27950
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 410024..421133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG358_RS02020 (EG358_02025)	-	410829..411209 (-)	381	WP_076561222.1	group III truncated hemoglobin	-
EG358_RS02025 (EG358_02030)	-	411344..412315 (+)	972	WP_076561223.1	ion channel	-
EG358_RS02030 (EG358_02035)	-	412315..412803 (+)	489	WP_076561224.1	YkgJ family cysteine cluster protein	-
EG358_RS02035 (EG358_02040)	-	412972..413340 (-)	369	WP_076561335.1	iron chaperone	-
EG358_RS02040 (EG358_02045)	gdhA	413474..414832 (-)	1359	WP_076561225.1	NADP-specific glutamate dehydrogenase	-
EG358_RS02045 (EG358_02050)	dprA	415024..416133 (-)	1110	WP_076561226.1	DNA-processing protein DprA	Machinery gene
EG358_RS02050 (EG358_02055)	-	416169..416936 (-)	768	WP_076561227.1	rhomboid family intramembrane serine protease	-
EG358_RS02055 (EG358_02060)	-	417140..418072 (+)	933	WP_076561228.1	DUF3078 domain-containing protein	-
EG358_RS02060 (EG358_02065)	-	418184..419104 (+)	921	WP_076561229.1	DUF3078 domain-containing protein	-
EG358_RS02065 (EG358_02070)	sufD	419174..420481 (-)	1308	WP_076561230.1	Fe-S cluster assembly protein SufD	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41457.40 Da
• Isoelectric Point: 6.9687

>NTDB_id=327232 EG358_RS02045 WP_076561226.1 415024..416133(-) (dprA) [Chryseobacterium indoltheticum strain ATCC 27950]
MYSEEHLYSIALRECNFIGDINFSKLVRRFGSAENVWKTSKKELSKTDGIGTKIISDIGNPEHLKFAEEELLFCEKNSIK
INLRHQNDLHFLLNECDDAPAILYQKGNFETKHKTISLVGTRNITSYGKKFIEDFFEASKPHPYISVSGLALGVDKEIHE
QSLKHQIPTIGILAHGFHTLYPSANKKLSEKILEENGGLLTEFNSSRKPDRENFIQRNRIIAGISPATIVVETAFGGGSV
STATFANTYNRDVFALPGKITDKYSQGCNQLIFQNKATAISTIKDLLDLLGLNDPKEKIEELFPHSKITVQLSENQELIY
KQIIENPHITLDDLAEKISVSSHKLLPVILELELLGKVKSFSGRQFIAL

Nucleotide

• Length: 1110 bp

>NTDB_id=327232 EG358_RS02045 WP_076561226.1 415024..416133(-) (dprA) [Chryseobacterium indoltheticum strain ATCC 27950]
ATGTATTCTGAAGAACATCTTTATTCTATCGCTCTGCGGGAGTGTAATTTTATTGGTGATATTAATTTTTCTAAGCTTGT
ACGCCGTTTTGGATCAGCAGAAAATGTTTGGAAAACTTCTAAAAAAGAACTCAGCAAGACGGATGGAATTGGTACAAAAA
TCATTTCCGACATTGGAAATCCTGAGCATCTCAAATTTGCTGAAGAAGAACTTTTGTTTTGCGAAAAGAATTCTATAAAA
ATCAATTTACGCCATCAAAATGATCTTCATTTTTTATTGAATGAATGTGACGATGCTCCAGCAATACTCTATCAGAAAGG
AAATTTTGAAACAAAGCACAAAACTATAAGCTTAGTCGGAACAAGAAATATAACATCTTACGGGAAAAAATTTATTGAAG
ATTTCTTTGAAGCATCAAAACCACATCCGTATATTTCTGTAAGTGGTCTCGCTTTGGGCGTCGATAAAGAAATTCACGAG
CAATCTTTAAAACATCAAATTCCCACCATTGGAATTCTAGCCCATGGTTTTCATACCTTATATCCTTCTGCCAATAAAAA
GCTTTCAGAAAAGATTCTTGAGGAAAATGGAGGATTGCTTACCGAATTTAATTCATCAAGAAAACCGGACCGCGAAAATT
TCATCCAAAGAAATAGAATTATTGCCGGCATTTCTCCTGCAACCATTGTTGTAGAAACAGCATTTGGCGGCGGTTCCGTC
AGTACTGCAACATTCGCAAATACTTATAACAGAGATGTTTTTGCCCTTCCCGGAAAGATTACCGATAAATACAGCCAAGG
ATGTAATCAACTTATTTTTCAGAACAAAGCGACTGCCATTTCGACCATAAAAGACCTACTTGATCTCCTCGGACTGAATG
ATCCTAAAGAAAAAATTGAAGAACTTTTCCCTCATAGTAAAATAACAGTTCAATTATCTGAAAATCAAGAATTAATATAT
AAACAAATTATAGAAAATCCGCACATTACTTTAGACGATTTGGCAGAGAAAATATCGGTGTCTTCACACAAATTATTACC
TGTAATTTTAGAATTAGAGCTTTTGGGAAAAGTAAAATCATTTTCCGGGAGACAATTTATAGCATTATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

3D structure

• AlphaFold DB: A0A381F6N2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	54.67	98.645	0.539