Detailed information NTG0327173

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EG342_RS06130
• Genome accession: NZ_CP033924
• Coordinates: 1428727..1429836 (-)
• Length: 369 a.a.
• NCBI ID: WP_103288869.1
• Uniprot ID: -
• Organism: Chryseobacterium lactis strain KC_1864
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1423727..1434836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG342_RS06100 (EG342_06135)	-	1424033..1424413 (-)	381	WP_103288863.1	group III truncated hemoglobin	-
EG342_RS06105 (EG342_06140)	-	1424556..1425527 (+)	972	WP_103288864.1	ion channel	-
EG342_RS06110 (EG342_06145)	-	1425528..1426016 (+)	489	WP_103288865.1	YkgJ family cysteine cluster protein	-
EG342_RS06115 (EG342_06150)	-	1426333..1426632 (+)	300	WP_103288866.1	hypothetical protein	-
EG342_RS06120 (EG342_06155)	-	1426677..1427045 (-)	369	WP_103288867.1	iron chaperone	-
EG342_RS06125 (EG342_06160)	gdhA	1427178..1428536 (-)	1359	WP_103288868.1	NADP-specific glutamate dehydrogenase	-
EG342_RS06130 (EG342_06165)	dprA	1428727..1429836 (-)	1110	WP_103288869.1	DNA-processing protein DprA	Machinery gene
EG342_RS06135 (EG342_06170)	-	1429874..1430641 (-)	768	WP_103288870.1	rhomboid family intramembrane serine protease	-
EG342_RS06140 (EG342_06175)	-	1430892..1431818 (+)	927	WP_103288871.1	DUF3078 domain-containing protein	-
EG342_RS06145 (EG342_06180)	-	1432047..1432970 (+)	924	WP_103288872.1	DUF3078 domain-containing protein	-
EG342_RS06150 (EG342_06185)	sufD	1433040..1434347 (-)	1308	WP_103289315.1	Fe-S cluster assembly protein SufD	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41495.42 Da
• Isoelectric Point: 7.4780

>NTDB_id=327173 EG342_RS06130 WP_103288869.1 1428727..1429836(-) (dprA) [Chryseobacterium lactis strain KC_1864]
MISEEYFYAIALRECSQIGDINFHKLVRTFGSAHEAWKRAKKEYKKIDGLGQKTVSDIGNETHLKFAEKEIQFCEKNNIL
IRLRHLNEIPTLLNECIDAPAILYQKGNIEDSLKKVSMVGTRNMTSYGKQFIEDFFEATQTSKYASVSGLALGIDKEVHE
QSIRNHKPTIAVLAHGFQFLYPAKNRKLSEKILQEGGALLTEFNSSRKPDRENFIQRNRIVAGISPSTIVVETGFGGGSV
STASFANEYNRDVFALPGKITDPYSQGCNQLIFQNKAASISTIKDLISMLGFNNPGEKIEELFPYSESTIQLTDNQKTIH
QFIKENPQITLDDLVQETALPSHKILPIILELELLGKVKSFSGRQFVVI

Nucleotide

• Length: 1110 bp

>NTDB_id=327173 EG342_RS06130 WP_103288869.1 1428727..1429836(-) (dprA) [Chryseobacterium lactis strain KC_1864]
ATGATTTCCGAAGAATATTTTTATGCAATCGCTCTCCGCGAATGCTCTCAGATTGGCGACATTAATTTTCATAAACTTGT
CCGAACCTTTGGGAGTGCCCATGAAGCATGGAAAAGAGCAAAGAAAGAGTATAAAAAAATTGATGGGCTGGGTCAAAAGA
CAGTCTCCGATATCGGAAATGAAACCCATTTGAAATTCGCAGAAAAAGAGATTCAATTCTGTGAAAAGAATAATATACTC
ATCAGACTGCGACACCTCAATGAAATTCCGACTCTTCTCAATGAATGTATAGATGCACCTGCTATACTCTATCAAAAGGG
AAACATAGAAGATTCTCTGAAAAAAGTAAGTATGGTAGGAACCCGAAATATGACGTCATACGGGAAACAGTTTATCGAAG
ATTTTTTTGAGGCCACACAAACATCAAAATATGCATCAGTAAGCGGCCTTGCACTGGGCATTGATAAAGAAGTTCATGAA
CAGTCAATCCGCAATCACAAACCAACCATTGCCGTTTTGGCGCATGGTTTCCAATTTCTGTATCCTGCAAAAAACAGGAA
ACTTTCAGAGAAAATCCTTCAGGAAGGAGGAGCTTTACTCACCGAGTTTAATTCATCAAGAAAACCGGACCGTGAAAATT
TCATCCAAAGAAACAGAATTGTTGCAGGAATTTCGCCTTCTACCATCGTCGTAGAAACTGGTTTTGGAGGTGGATCTGTA
AGCACGGCATCTTTTGCCAACGAATACAACAGGGATGTATTTGCTCTTCCCGGAAAAATAACAGATCCATACAGCCAGGG
TTGTAATCAATTGATTTTCCAGAACAAAGCGGCATCGATTTCTACGATAAAAGATCTTATCAGTATGCTCGGATTTAATA
ATCCCGGCGAAAAAATTGAAGAGCTTTTCCCTTACAGCGAATCAACAATACAATTAACTGATAATCAGAAAACAATACAT
CAATTCATCAAAGAAAATCCACAGATAACTTTGGATGATTTGGTTCAGGAAACAGCACTTCCTTCTCATAAAATTTTACC
AATAATTTTGGAATTGGAACTTTTGGGGAAAGTAAAATCATTTTCCGGGAGGCAATTTGTAGTGATTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-278)

• DprA winged helix domain (DprA_WH) (308-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	53.134	99.458	0.528