Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   FNV66_RS37955 Genome accession   NZ_CP041607
Coordinates   8148211..8148987 (-) Length   258 a.a.
NCBI ID   WP_054229877.1    Uniprot ID   A0A250VHF9
Organism   Streptomyces sp. S1D4-14     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 8143211..8153987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNV66_RS37945 (FNV66_38460) - 8143476..8145521 (+) 2046 WP_181360933.1 IucA/IucC family siderophore biosynthesis protein -
  FNV66_RS37950 (FNV66_38465) - 8145616..8147619 (+) 2004 WP_097286515.1 ATP-dependent DNA helicase -
  FNV66_RS37955 (FNV66_38470) dinR/lexA 8148211..8148987 (-) 777 WP_054229877.1 transcriptional repressor LexA Regulator
  FNV66_RS37960 (FNV66_38475) nrdR 8149505..8150089 (+) 585 WP_097286516.1 transcriptional regulator NrdR -
  FNV66_RS37965 (FNV66_38480) - 8150241..8153147 (+) 2907 WP_054229879.1 vitamin B12-dependent ribonucleotide reductase -
  FNV66_RS37970 (FNV66_38485) - 8153261..8153794 (-) 534 WP_143603130.1 TerD family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27935.63 Da        Isoelectric Point: 7.4755

>NTDB_id=327147 FNV66_RS37955 WP_054229877.1 8148211..8148987(-) (dinR/lexA) [Streptomyces sp. S1D4-14]
MTTTADSATITAQDRSQGRLEPVHAMNEATNHEGPKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSAQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYQPI
PGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=327147 FNV66_RS37955 WP_054229877.1 8148211..8148987(-) (dinR/lexA) [Streptomyces sp. S1D4-14]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCACGAATCATGAGGGGCCCAAGCGCTCCCTGCCAGGGCGACCTCCAGGCATCCGCGCCGACAGCTCGGGACTCA
CCGACAGGCAGCGCCGGGTGATCGAGGTCATCCGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCGATGCGGGAGATC
GGACAGGCGGTCGGCCTCTCCAGCACCTCGTCGGTCGCCCACCAGCTGATGGCACTGGAGCGCAAGGGCTTCCTGCGCCG
CGATCCGCACCGTCCGAGGGCGTACGAGGTCCGGGGCTCCGACCAGTCCTCGGCACAGCCCACGGACACGGCGGGCAAGC
CGGCCGCGTCGTACGTGCCGCTCGTCGGCCGTATCGCCGCCGGTGGCCCGATCCTGGCCGAGGAGTCGGTGGAGGACGTC
TTCCCCCTCCCCCGGCAGCTGGTCGGTGACGGCGAGCTGTTCGTCCTGAAGGTCGTCGGCGACTCGATGATCGAGGCCGC
CATCTGCGACGGGGACTGGGTGACGGTCCGGCGCCAGCCGGTCGCGGAGAACGGTGACATCGTGGCCGCGATGCTGGACG
GCGAGGCCACGGTGAAGCGGTTCAAGCGTGAGGACGGCCATGTGTGGCTCCTCCCGCACAACGCCGCGTACCAGCCGATT
CCCGGCGACGAGGCGACCATCCTGGGCAAGGTGGTGGCGGTGCTGCGGCGCGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A250VHF9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

81.395

0.372