Detailed information NTG0327125

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EG345_RS21445
• Genome accession: NZ_CP033921
• Coordinates: 4669655..4670764 (+)
• Length: 369 a.a.
• NCBI ID: WP_123877247.1
• Uniprot ID: A0A376ELN3
• Organism: Chryseobacterium carnipullorum strain F9942
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4664655..4675764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG345_RS21425 (EG345_21695)	sufD	4664968..4666275 (+)	1308	WP_181876136.1	Fe-S cluster assembly protein SufD	-
EG345_RS21430 (EG345_21700)	-	4666347..4667270 (-)	924	WP_123877245.1	DUF3078 domain-containing protein	-
EG345_RS21435 (EG345_21705)	-	4667505..4668431 (-)	927	WP_073328089.1	DUF3078 domain-containing protein	-
EG345_RS21440 (EG345_21710)	-	4668688..4669455 (+)	768	WP_123877246.1	rhomboid family intramembrane serine protease	-
EG345_RS21445 (EG345_21715)	dprA	4669655..4670764 (+)	1110	WP_123877247.1	DNA-processing protein DprA	Machinery gene
EG345_RS21450 (EG345_21720)	gdhA	4670955..4672313 (+)	1359	WP_034739395.1	NADP-specific glutamate dehydrogenase	-
EG345_RS21455 (EG345_21725)	-	4672544..4672858 (-)	315	WP_123877248.1	hypothetical protein	-
EG345_RS21460 (EG345_21730)	-	4672973..4673461 (-)	489	WP_123877249.1	YkgJ family cysteine cluster protein	-
EG345_RS21465 (EG345_21735)	-	4673462..4674433 (-)	972	WP_123877250.1	ion channel	-
EG345_RS21470 (EG345_21740)	-	4674800..4675600 (-)	801	WP_123877251.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41348.09 Da
• Isoelectric Point: 6.3121

>NTDB_id=327125 EG345_RS21445 WP_123877247.1 4669655..4670764(+) (dprA) [Chryseobacterium carnipullorum strain F9942]
MISEEHLYAIALRECSLIGDINFHKLIRTFGTAEEVWKRAKKEYTKTDGIGRKTVSDIGNEDYLKFAEKEIQFCEKNNIR
ILLRYFNELPHLLNECDDSPAILYQKGNFDDSLQKISIVGTRNMTSYGQQFIWDFLEAASSSKCISVSGLALGVDKEVHE
QSIHYKIPTVAVLAHGFHMLYPSKNKKLSEKILEEGGALFTEFNSSRKPDRENFIQRNRIIAGMSPSTIVVETGFGGGSV
STAAFANDYNREVFALPGKITDPYSQGCNQLIFQNKAAAISTVKDLVDSLGFNHSKEKVAELFPYSEISIQLTENQESIY
QSIKANPQVSLDDLAQMVSVPSYKILPVILELELLGKVKSFSGRQFSAI

Nucleotide

• Length: 1110 bp

>NTDB_id=327125 EG345_RS21445 WP_123877247.1 4669655..4670764(+) (dprA) [Chryseobacterium carnipullorum strain F9942]
ATGATCTCCGAAGAACATCTTTATGCCATCGCTTTGCGCGAATGCAGCCTGATTGGCGACATTAATTTTCATAAGCTAAT
AAGAACCTTTGGAACTGCGGAGGAAGTCTGGAAAAGGGCAAAAAAAGAATATACTAAAACAGATGGTATCGGCAGAAAAA
CAGTTTCTGATATCGGAAATGAAGACTATTTGAAATTTGCCGAAAAAGAAATACAGTTCTGTGAAAAAAACAATATTAGG
ATTTTGCTTCGATACTTTAATGAGCTCCCTCATCTGCTCAACGAATGTGATGACTCCCCTGCAATTCTCTATCAAAAAGG
AAATTTTGACGATTCATTACAAAAAATCAGCATTGTAGGAACCCGAAATATGACTTCCTATGGCCAACAGTTTATCTGGG
ATTTCTTAGAAGCTGCTTCATCCTCCAAATGCATATCAGTGAGCGGATTAGCTCTTGGCGTAGATAAGGAGGTTCATGAA
CAATCTATTCACTATAAAATACCGACCGTCGCCGTGCTGGCTCATGGTTTCCATATGCTGTATCCTTCCAAAAATAAAAA
GCTCTCCGAAAAGATTCTGGAAGAAGGCGGCGCTCTGTTCACCGAATTCAATTCATCCAGAAAGCCCGACCGCGAAAATT
TCATTCAAAGAAACAGAATTATAGCTGGAATGTCTCCCTCAACCATCGTTGTTGAGACCGGATTTGGAGGTGGATCTGTA
AGCACGGCAGCTTTTGCCAATGATTATAACCGCGAAGTTTTTGCATTGCCGGGTAAGATCACAGATCCTTACAGTCAGGG
GTGTAATCAATTGATTTTTCAGAATAAAGCAGCAGCTATTTCTACTGTAAAAGATCTTGTGGATTCATTGGGATTCAATC
ATTCAAAAGAGAAAGTAGCCGAGTTGTTCCCTTACAGTGAAATAAGTATACAACTTACTGAAAATCAAGAATCCATTTAT
CAGTCGATCAAAGCCAATCCTCAGGTGTCTCTGGATGATCTGGCGCAGATGGTTTCAGTGCCTTCTTATAAAATTCTTCC
TGTAATCTTGGAATTAGAGCTTTTGGGGAAAGTAAAATCATTTTCCGGGAGGCAATTTAGTGCAATTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

• DprA winged helix domain (DprA_WH) (310-363)

3D structure

• AlphaFold DB: A0A376ELN3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	53.406	99.458	0.531