Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | EGM96_RS04185 | Genome accession | NZ_CP033876 |
| Coordinates | 893612..894034 (+) | Length | 140 a.a. |
| NCBI ID | WP_031961381.1 | Uniprot ID | A0A836M1M3 |
| Organism | Acinetobacter baumannii strain WU_164 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 888612..899034
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGM96_RS04175 (EGM96_04195) | - | 888969..893039 (+) | 4071 | WP_031961384.1 | PilC/PilY family type IV pilus protein | - |
| EGM96_RS04180 (EGM96_04200) | - | 893049..893612 (+) | 564 | WP_031961383.1 | type IV pilin protein | - |
| EGM96_RS04185 (EGM96_04205) | pilE | 893612..894034 (+) | 423 | WP_031961381.1 | type IV pilin protein | Machinery gene |
| EGM96_RS04190 (EGM96_04210) | rpsP | 894181..894432 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| EGM96_RS04195 (EGM96_04215) | rimM | 894452..895000 (+) | 549 | WP_031961380.1 | ribosome maturation factor RimM | - |
| EGM96_RS04200 (EGM96_04220) | trmD | 895046..895786 (+) | 741 | WP_031961379.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| EGM96_RS04205 (EGM96_04225) | rplS | 895994..896362 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| EGM96_RS04210 (EGM96_04230) | - | 896416..897357 (-) | 942 | WP_104131029.1 | lipase family alpha/beta hydrolase | - |
| EGM96_RS04215 (EGM96_04235) | - | 897472..898506 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 15404.52 Da Isoelectric Point: 7.7994
>NTDB_id=326717 EGM96_RS04185 WP_031961381.1 893612..894034(+) (pilE) [Acinetobacter baumannii strain WU_164]
MKKYEGFTLIELMIVVAIIAILAAIAYPSYTQYKIRTNRADVQSEMMQTAQRLQSYYVINHNYTSATLNNGLTTKDYPAS
NPIYTIALVTNSQTWTLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKKYEGFTLIELMIVVAIIAILAAIAYPSYTQYKIRTNRADVQSEMMQTAQRLQSYYVINHNYTSATLNNGLTTKDYPAS
NPIYTIALVTNSQTWTLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 423 bp
>NTDB_id=326717 EGM96_RS04185 WP_031961381.1 893612..894034(+) (pilE) [Acinetobacter baumannii strain WU_164]
ATGAAAAAATATGAAGGTTTTACCCTCATAGAGCTAATGATTGTGGTTGCTATTATTGCAATTTTGGCAGCAATTGCTTA
CCCCTCCTATACACAATATAAAATTCGGACGAATCGTGCAGATGTGCAAAGTGAAATGATGCAAACCGCACAACGTCTAC
AAAGTTACTATGTGATTAATCATAATTATACTAGTGCTACACTCAATAATGGTTTAACTACTAAAGATTATCCAGCATCC
AATCCAATTTATACTATTGCACTAGTCACAAACTCTCAAACATGGACGCTTACTGCAACTCCTATTTCTACTAGCTCACA
AGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTATCTG
CTTCATCGAGTTGGACCGAGTAA
ATGAAAAAATATGAAGGTTTTACCCTCATAGAGCTAATGATTGTGGTTGCTATTATTGCAATTTTGGCAGCAATTGCTTA
CCCCTCCTATACACAATATAAAATTCGGACGAATCGTGCAGATGTGCAAAGTGAAATGATGCAAACCGCACAACGTCTAC
AAAGTTACTATGTGATTAATCATAATTATACTAGTGCTACACTCAATAATGGTTTAACTACTAAAGATTATCCAGCATCC
AATCCAATTTATACTATTGCACTAGTCACAAACTCTCAAACATGGACGCTTACTGCAACTCCTATTTCTACTAGCTCACA
AGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTATCTG
CTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
64.493 |
98.571 |
0.636 |
| comF | Acinetobacter baylyi ADP1 |
58.156 |
100 |
0.586 |
| pilA | Pseudomonas aeruginosa PAK |
35.374 |
100 |
0.371 |