Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | EGM95_RS01800 | Genome accession | NZ_CP033869 |
| Coordinates | 383210..383683 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214057.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MRSN15313 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 378210..388683
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGM95_RS01775 (EGM95_01775) | - | 378672..380777 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| EGM95_RS01780 (EGM95_01780) | - | 380818..380948 (-) | 131 | Protein_336 | hypothetical protein | - |
| EGM95_RS01785 (EGM95_01785) | rpoZ | 380987..381265 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| EGM95_RS01790 (EGM95_01790) | gmk | 381338..381967 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| EGM95_RS01795 (EGM95_01795) | ispH | 382090..383040 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| EGM95_RS01800 (EGM95_01800) | fimU | 383210..383683 (+) | 474 | WP_001214057.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| EGM95_RS01805 (EGM95_01805) | pilV | 383677..384237 (+) | 561 | WP_094474343.1 | type IV pilus modification protein PilV | Machinery gene |
| EGM95_RS01810 (EGM95_01810) | pilW | 384238..385239 (+) | 1002 | WP_000079202.1 | PilW family protein | Machinery gene |
| EGM95_RS01815 (EGM95_01815) | pilX | 385236..386054 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16863.51 Da Isoelectric Point: 8.5355
>NTDB_id=326647 EGM95_RS01800 WP_001214057.1 383210..383683(+) (fimU) [Acinetobacter baumannii strain MRSN15313]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLEIKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLEIKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=326647 EGM95_RS01800 WP_001214057.1 383210..383683(+) (fimU) [Acinetobacter baumannii strain MRSN15313]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAATTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAATTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |