Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EG364_RS07255 | Genome accession | NZ_CP033862 |
| Coordinates | 1458417..1458797 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. FDAARGOS_560 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1453417..1463797
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG364_RS07225 (EG364_07230) | kdsB | 1454320..1455081 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| EG364_RS07230 (EG364_07235) | - | 1455093..1456073 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| EG364_RS07235 (EG364_07240) | - | 1456085..1456426 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| EG364_RS07240 (EG364_07245) | - | 1456444..1457217 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| EG364_RS07245 (EG364_07250) | - | 1457255..1457863 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| EG364_RS07250 (EG364_07255) | - | 1457873..1458427 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| EG364_RS07255 (EG364_07260) | xcpV | 1458417..1458797 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EG364_RS07260 (EG364_07265) | xcpW | 1458797..1459498 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EG364_RS07265 (EG364_07270) | gspK | 1459498..1460457 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| EG364_RS07270 (EG364_07275) | - | 1460688..1461284 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| EG364_RS07275 (EG364_07280) | ung | 1461335..1462048 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| EG364_RS07280 (EG364_07285) | - | 1462045..1463169 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EG364_RS07285 (EG364_07290) | tadA | 1463176..1463679 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=326508 EG364_RS07255 WP_000836911.1 1458417..1458797(+) (xcpV) [Acinetobacter sp. FDAARGOS_560]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=326508 EG364_RS07255 WP_000836911.1 1458417..1458797(+) (xcpV) [Acinetobacter sp. FDAARGOS_560]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |