Detailed information NTG0032615

Bioinformatically predicted

Overview

• Name: recR
• Type: Machinery gene
• Locus tag: LPA_RS14305
• Genome accession: NC_014125
• Coordinates: 3218860..3219453 (+)
• Length: 197 a.a.
• NCBI ID: WP_011216607.1
• Uniprot ID: Q5WT52
• Organism: Legionella pneumophila 2300/99 Alcoy
• Function: promote later steps in plasmid transformation (predicted from homology) Homologous recombination

Genomic Context

Location: 3213860..3224453

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPA_RS14295 (lpa_04013)	dnaX	3216809..3218479 (+)	1671	WP_011947649.1	DNA polymerase III subunit gamma/tau	-
LPA_RS14300 (lpa_04014)	-	3218513..3218851 (+)	339	WP_011216606.1	YbaB/EbfC family nucleoid-associated protein	-
LPA_RS14305 (lpa_04015)	recR	3218860..3219453 (+)	594	WP_011216607.1	recombination mediator RecR	Machinery gene
LPA_RS14310 (lpa_04017)	-	3219446..3220306 (+)	861	WP_011947650.1	DUF547 domain-containing protein	-
LPA_RS14315 (lpa_04018)	-	3220303..3222300 (+)	1998	WP_011947651.1	sulfatase-like hydrolase/transferase	-
LPA_RS14320 (lpa_04019)	-	3222405..3223883 (-)	1479	WP_011947652.1	hypothetical protein	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21705.01 Da
• Isoelectric Point: 6.6782

>NTDB_id=32615 LPA_RS14305 WP_011216607.1 3218860..3219453(+) (recR) [Legionella pneumophila 2300/99 Alcoy]
MDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCTLCQNPNRDSTLLC
VVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDE
TVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV

Nucleotide

• Length: 594 bp

>NTDB_id=32615 LPA_RS14305 WP_011216607.1 3218860..3219453(+) (recR) [Legionella pneumophila 2300/99 Alcoy]
ATGGATGCTCTAAGCCGCTTGGTAGAGGCGCTTCGCTGTCTTCCCGGTGTGGGACCAAAATCAGCACAAAGGATGGTGTT
CCATTTATTGCAGCACCAAAGACAGCGAGGTTTACACCTTGCCTCCTGTTTGGAACAGGCAATGAAGCACATTAGTCATT
GCCAGCAGTGTAATAATTACACTGAACAAACTCTGTGTACTCTTTGCCAAAACCCCAATCGGGATTCAACATTACTTTGC
GTGGTAGAGAGTCCAGCGGATGTTTCTGCCATAGAACAAAGCAATTCCTTTCAAGGTAAATATTTTGTCCTTATGGGAAA
AATTTCTCCTCTTGATGGCTTGGGACCTGATGACATAGGGCTACCGAAACTTAAGGAGTTAATTATTAGGGAAAAAATTC
AGGAAGTTATTCTTGCATTAAGCCCCAGTGTTGAAAGCCAGACCACAATTCATTTTATTCATCAGTTGCTAAAGGATGAA
ACCGTCAATATCAGTCAGTTAGCACATGGAATACCATCAGGTGGTGAATTAGAATTTTTAGATGGGAATACTATAAGCAG
TGCCCTTAAGAACAGAGCTGTGATTAATGTTTAA

Domains

Predicted by InterProScan.

• Toprim domain (Toprim_4) (79-168)

• RecR protein (RecR_ZnF) (38-75)

3D structure

• AlphaFold DB: Q5WT52

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recR	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	40.513	98.985	0.401
recR	Bacillus subtilis subsp. subtilis str. 168	39.267	96.954	0.381