Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EGX82_RS03835 Genome accession   NZ_CP033822
Coordinates   743313..744038 (-) Length   241 a.a.
NCBI ID   WP_000912314.1    Uniprot ID   A0AAW6XYE4
Organism   Streptococcus agalactiae strain FDAARGOS_512     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 738313..749038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX82_RS03800 (EGX82_03800) - 738324..738620 (-) 297 WP_001140526.1 YlxR family protein -
  EGX82_RS03805 (EGX82_03805) nusA 738642..739793 (-) 1152 WP_000032295.1 transcription termination factor NusA -
  EGX82_RS03810 (EGX82_03810) rimP 739829..740305 (-) 477 WP_041971671.1 ribosome maturation factor RimP -
  EGX82_RS03820 (EGX82_03820) trmB 740794..741429 (-) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EGX82_RS03825 (EGX82_03825) ccrZ 741419..742219 (-) 801 WP_000155919.1 cell cycle regulator CcrZ -
  EGX82_RS03830 (EGX82_03830) - 742277..743311 (-) 1035 WP_000732715.1 ABC transporter permease -
  EGX82_RS03835 (EGX82_03835) pptA 743313..744038 (-) 726 WP_000912314.1 ABC transporter ATP-binding protein Regulator
  EGX82_RS03840 (EGX82_03840) - 744110..744296 (+) 187 Protein_728 hypothetical protein -
  EGX82_RS03845 (EGX82_03845) - 744348..744851 (-) 504 WP_000773458.1 hypothetical protein -
  EGX82_RS03850 (EGX82_03850) - 745187..745606 (+) 420 WP_000368099.1 HIT family protein -
  EGX82_RS03855 (EGX82_03855) - 745603..745899 (+) 297 WP_000690175.1 hypothetical protein -
  EGX82_RS03860 (EGX82_03860) - 745963..747270 (-) 1308 WP_000708161.1 LCP family protein -
  EGX82_RS03865 (EGX82_03865) - 747279..747800 (-) 522 WP_000043149.1 GNAT family N-acetyltransferase -
  EGX82_RS03870 (EGX82_03870) tsaE 747793..748236 (-) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26834.27 Da        Isoelectric Point: 4.6310

>NTDB_id=326112 EGX82_RS03835 WP_000912314.1 743313..744038(-) (pptA) [Streptococcus agalactiae strain FDAARGOS_512]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=326112 EGX82_RS03835 WP_000912314.1 743313..744038(-) (pptA) [Streptococcus agalactiae strain FDAARGOS_512]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763

Multiple sequence alignment