Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EGX82_RS03355 Genome accession   NZ_CP033822
Coordinates   654978..656051 (-) Length   357 a.a.
NCBI ID   WP_000790651.1    Uniprot ID   A0AAW6XPT9
Organism   Streptococcus agalactiae strain FDAARGOS_512     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 649978..661051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX82_RS03335 (EGX82_03335) - 651250..651765 (-) 516 WP_000919807.1 VanZ family protein -
  EGX82_RS03340 (EGX82_03340) rlmN 651765..652871 (-) 1107 WP_000039435.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EGX82_RS03345 (EGX82_03345) - 652922..653500 (-) 579 WP_001224500.1 YutD-like domain-containing protein -
  EGX82_RS03350 (EGX82_03350) - 653569..654903 (-) 1335 WP_000137519.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  EGX82_RS03355 (EGX82_03355) sepM 654978..656051 (-) 1074 WP_000790651.1 SepM family pheromone-processing serine protease Regulator
  EGX82_RS03360 (EGX82_03360) coaD 656041..656526 (-) 486 WP_000161892.1 pantetheine-phosphate adenylyltransferase -
  EGX82_RS03365 (EGX82_03365) - 656523..656813 (-) 291 WP_000384889.1 hypothetical protein -
  EGX82_RS03370 (EGX82_03370) rsmD 656825..657364 (-) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EGX82_RS03380 (EGX82_03380) - 657495..657944 (+) 450 WP_000592261.1 hypothetical protein -
  EGX82_RS03385 (EGX82_03385) asnA 657989..658981 (-) 993 WP_000748014.1 aspartate--ammonia ligase -
  EGX82_RS03390 (EGX82_03390) - 659096..660160 (-) 1065 WP_000021305.1 MmcQ/YjbR family DNA-binding protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39131.31 Da        Isoelectric Point: 10.4286

>NTDB_id=326111 EGX82_RS03355 WP_000790651.1 654978..656051(-) (sepM) [Streptococcus agalactiae strain FDAARGOS_512]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=326111 EGX82_RS03355 WP_000790651.1 654978..656051(-) (sepM) [Streptococcus agalactiae strain FDAARGOS_512]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTTTCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCGGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.027

94.958

0.655


Multiple sequence alignment