Detailed information
Bioinformatically predicted
Overview
| Name | radC | Type | Machinery gene |
| Locus tag | LPA_RS12945 | Genome accession | NC_014125 |
| Coordinates | 2916390..2917073 (+) | Length | 227 a.a. |
| NCBI ID | WP_011947404.1 | Uniprot ID | A5IEW9 |
| Organism | Legionella pneumophila 2300/99 Alcoy | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2911390..2922073
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPA_RS12925 (lpa_03621) | - | 2911404..2913137 (+) | 1734 | WP_011947400.1 | tetratricopeptide repeat protein | - |
| LPA_RS12930 (lpa_03622) | - | 2913243..2914631 (-) | 1389 | WP_013101833.1 | phosphomannomutase/phosphoglucomutase | - |
| LPA_RS12935 (lpa_03624) | dut | 2914632..2915090 (-) | 459 | WP_011947402.1 | dUTP diphosphatase | - |
| LPA_RS12940 (lpa_03625) | coaBC | 2915117..2916313 (-) | 1197 | WP_013101834.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| LPA_RS12945 (lpa_03626) | radC | 2916390..2917073 (+) | 684 | WP_011947404.1 | DNA repair protein RadC | Machinery gene |
| LPA_RS12950 (lpa_03627) | - | 2917109..2917345 (+) | 237 | WP_011947405.1 | hypothetical protein | - |
| LPA_RS12955 (lpa_03628) | lepB | 2917425..2921309 (+) | 3885 | WP_013101835.1 | Dot/Icm T4SS GTPase-activating effector LepB | - |
| LPA_RS12960 (lpa_03630) | thpR | 2921433..2921996 (-) | 564 | WP_013101836.1 | RNA 2',3'-cyclic phosphodiesterase | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 25706.30 Da Isoelectric Point: 6.5825
>NTDB_id=32606 LPA_RS12945 WP_011947404.1 2916390..2917073(+) (radC) [Legionella pneumophila 2300/99 Alcoy]
MMVAHTAQQLDLREKLLTNGVHSLSDIELLAVFISSGNNKKSCLQLAYELTKHLGNLRNILNADLQSFKSIHGLGEVRYA
QLQAAKEICHRSDFIDLQKEIQLSNTQQTYAFLKKRLRDYKNETFAALFLDSQHRIIAYEELFSGTINTATVYPRPIVER
VLQLNAAALILAHNHPSGLSDASQQDFAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWVCN
MMVAHTAQQLDLREKLLTNGVHSLSDIELLAVFISSGNNKKSCLQLAYELTKHLGNLRNILNADLQSFKSIHGLGEVRYA
QLQAAKEICHRSDFIDLQKEIQLSNTQQTYAFLKKRLRDYKNETFAALFLDSQHRIIAYEELFSGTINTATVYPRPIVER
VLQLNAAALILAHNHPSGLSDASQQDFAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWVCN
Nucleotide
Download Length: 684 bp
>NTDB_id=32606 LPA_RS12945 WP_011947404.1 2916390..2917073(+) (radC) [Legionella pneumophila 2300/99 Alcoy]
ATGATGGTTGCCCATACAGCGCAGCAACTTGACTTGCGCGAAAAACTACTTACTAATGGAGTACATAGCCTCTCTGATAT
CGAACTGTTAGCCGTTTTCATCAGTTCGGGTAACAATAAAAAATCTTGTTTGCAACTAGCCTATGAGCTCACCAAACACT
TGGGAAATTTACGTAATATCCTCAATGCTGATCTGCAAAGCTTTAAATCAATCCATGGATTAGGAGAAGTTCGCTATGCG
CAACTTCAGGCTGCGAAAGAAATATGTCATCGTAGTGATTTCATTGATCTGCAAAAAGAAATCCAGTTATCTAACACGCA
ACAAACTTATGCTTTTTTAAAAAAACGACTGCGAGACTACAAAAATGAAACTTTTGCCGCACTCTTTCTGGATAGCCAAC
ACCGAATCATTGCTTATGAAGAATTATTCTCAGGAACCATCAACACAGCAACAGTCTATCCCAGACCGATTGTAGAACGT
GTATTGCAATTAAATGCTGCTGCTTTAATTCTGGCACATAATCATCCCTCGGGCTTGTCTGATGCAAGCCAGCAAGATTT
TGCCATTACAGAACGCATTCGAGATGCTCTGGACCTGGTAGACGCCAGGTTACTGGATCACATTGTCATTGGAGATAATG
AAGTGTATTCCATTTTTGCTGAGAACAAATGGGTATGTAACTAA
ATGATGGTTGCCCATACAGCGCAGCAACTTGACTTGCGCGAAAAACTACTTACTAATGGAGTACATAGCCTCTCTGATAT
CGAACTGTTAGCCGTTTTCATCAGTTCGGGTAACAATAAAAAATCTTGTTTGCAACTAGCCTATGAGCTCACCAAACACT
TGGGAAATTTACGTAATATCCTCAATGCTGATCTGCAAAGCTTTAAATCAATCCATGGATTAGGAGAAGTTCGCTATGCG
CAACTTCAGGCTGCGAAAGAAATATGTCATCGTAGTGATTTCATTGATCTGCAAAAAGAAATCCAGTTATCTAACACGCA
ACAAACTTATGCTTTTTTAAAAAAACGACTGCGAGACTACAAAAATGAAACTTTTGCCGCACTCTTTCTGGATAGCCAAC
ACCGAATCATTGCTTATGAAGAATTATTCTCAGGAACCATCAACACAGCAACAGTCTATCCCAGACCGATTGTAGAACGT
GTATTGCAATTAAATGCTGCTGCTTTAATTCTGGCACATAATCATCCCTCGGGCTTGTCTGATGCAAGCCAGCAAGATTT
TGCCATTACAGAACGCATTCGAGATGCTCTGGACCTGGTAGACGCCAGGTTACTGGATCACATTGTCATTGGAGATAATG
AAGTGTATTCCATTTTTGCTGAGAACAAATGGGTATGTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radC | Haemophilus influenzae Rd KW20 |
43.458 |
94.273 |
0.41 |