Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | EGX80_RS05660 | Genome accession | NZ_CP033815 |
| Coordinates | 1044982..1045935 (+) | Length | 317 a.a. |
| NCBI ID | WP_011054117.1 | Uniprot ID | A0A5S4TQH7 |
| Organism | Streptococcus pyogenes strain FDAARGOS_514 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1039982..1050935
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX80_RS05620 (EGX80_05630) | - | 1040809..1041174 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| EGX80_RS05625 (EGX80_05635) | comYA | 1041267..1042205 (+) | 939 | WP_011054114.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EGX80_RS05630 (EGX80_05640) | comYB | 1042141..1043175 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EGX80_RS05635 (EGX80_05645) | comYC | 1043177..1043503 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EGX80_RS05640 (EGX80_05650) | comGD | 1043478..1043906 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| EGX80_RS05645 (EGX80_05655) | comGE | 1043863..1044147 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | - |
| EGX80_RS05650 (EGX80_05660) | comYF | 1044140..1044574 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EGX80_RS05655 (EGX80_05665) | comGG | 1044558..1044884 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| EGX80_RS05660 (EGX80_05670) | comYH | 1044982..1045935 (+) | 954 | WP_011054117.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EGX80_RS05665 (EGX80_05675) | - | 1045994..1047190 (+) | 1197 | WP_010921803.1 | acetate kinase | - |
| EGX80_RS05670 (EGX80_05680) | - | 1047376..1047684 (+) | 309 | WP_011054118.1 | hypothetical protein | - |
| EGX80_RS05675 (EGX80_05685) | proC | 1047767..1048537 (-) | 771 | WP_002992745.1 | pyrroline-5-carboxylate reductase | - |
| EGX80_RS05680 (EGX80_05690) | pepA | 1048585..1049652 (-) | 1068 | WP_011054119.1 | glutamyl aminopeptidase | - |
| EGX80_RS05690 (EGX80_05700) | - | 1050117..1050401 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| EGX80_RS05695 (EGX80_05705) | - | 1050398..1050715 (+) | 318 | WP_002992751.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36027.22 Da Isoelectric Point: 4.7205
>NTDB_id=326044 EGX80_RS05660 WP_011054117.1 1044982..1045935(+) (comYH) [Streptococcus pyogenes strain FDAARGOS_514]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALIMLPDSIFGHPSNAKSIIVLQKQIDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALIMLPDSIFGHPSNAKSIIVLQKQIDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=326044 EGX80_RS05660 WP_011054117.1 1044982..1045935(+) (comYH) [Streptococcus pyogenes strain FDAARGOS_514]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGATACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCACTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTATGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAATAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGATACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCACTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTATGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAATAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA140 |
65.823 |
99.685 |
0.656 |