Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EGX85_RS08200 Genome accession   NZ_CP033814
Coordinates   1648216..1648884 (+) Length   222 a.a.
NCBI ID   WP_011274730.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain FDAARGOS_517     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1643216..1653884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX85_RS08180 (EGX85_08210) - 1643613..1644746 (+) 1134 WP_011274725.1 DegT/DnrJ/EryC1/StrS family aminotransferase -
  EGX85_RS08185 (EGX85_08215) - 1644767..1645702 (+) 936 WP_041615072.1 LCP family protein -
  EGX85_RS08190 (EGX85_08220) - 1645792..1647267 (-) 1476 WP_049395422.1 alkaline phosphatase -
  EGX85_RS13220 - 1647666..1647836 (+) 171 WP_011274728.1 hypothetical protein -
  EGX85_RS08195 - 1648022..1648186 (+) 165 WP_011274729.1 hypothetical protein -
  EGX85_RS08200 (EGX85_08225) braR 1648216..1648884 (+) 669 WP_011274730.1 response regulator transcription factor Regulator
  EGX85_RS08205 (EGX85_08230) braS 1648887..1649783 (+) 897 WP_011274731.1 sensor histidine kinase Regulator
  EGX85_RS08210 (EGX85_08235) - 1649965..1650714 (+) 750 WP_049395424.1 ABC transporter ATP-binding protein -
  EGX85_RS08215 (EGX85_08240) - 1650716..1652707 (+) 1992 WP_046308945.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25658.44 Da        Isoelectric Point: 4.5713

>NTDB_id=325995 EGX85_RS08200 WP_011274730.1 1648216..1648884(+) (braR) [Staphylococcus haemolyticus strain FDAARGOS_517]
MKVFIVEDDFVIAESLEQELSKWNYEVIVAKQFDNIIDVFNANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEVTVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=325995 EGX85_RS08200 WP_011274730.1 1648216..1648884(+) (braR) [Staphylococcus haemolyticus strain FDAARGOS_517]
ATGAAAGTATTCATCGTGGAAGATGATTTTGTCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTAATGCAAATCAACCACAACTCGTGTTGCTCGATATCAATC
TACCGACGTTCAATGGTTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTGCCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCGATTCAAATGGGCGGCGATGATTTTATCGAGAAACCATTTAATTTATCGTTAAC
GGTAACTAAGATTCAAGCACTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAGTTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCTTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.281

99.55

0.779

Multiple sequence alignment