Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EGX70_RS05275 Genome accession   NZ_CP033808
Coordinates   1068269..1069342 (-) Length   357 a.a.
NCBI ID   WP_123947986.1    Uniprot ID   -
Organism   Streptococcus sp. FDAARGOS_522     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1063269..1074342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX70_RS05255 (EGX70_05255) - 1064541..1065056 (-) 516 WP_000919803.1 VanZ family protein -
  EGX70_RS05260 (EGX70_05260) rlmN 1065056..1066162 (-) 1107 WP_000039434.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EGX70_RS05265 (EGX70_05265) - 1066213..1066791 (-) 579 WP_001224500.1 YutD-like domain-containing protein -
  EGX70_RS05270 (EGX70_05270) - 1066860..1068194 (-) 1335 WP_000137518.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  EGX70_RS05275 (EGX70_05275) sepM 1068269..1069342 (-) 1074 WP_123947986.1 SepM family pheromone-processing serine protease Regulator
  EGX70_RS05280 (EGX70_05280) coaD 1069332..1069817 (-) 486 WP_000161894.1 pantetheine-phosphate adenylyltransferase -
  EGX70_RS05285 (EGX70_05285) - 1069814..1070104 (-) 291 WP_000384889.1 hypothetical protein -
  EGX70_RS05290 (EGX70_05290) rsmD 1070116..1070655 (-) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EGX70_RS05300 (EGX70_05300) - 1070786..1071235 (+) 450 WP_000592261.1 hypothetical protein -
  EGX70_RS05305 (EGX70_05305) asnA 1071280..1072272 (-) 993 WP_000748015.1 aspartate--ammonia ligase -
  EGX70_RS05310 (EGX70_05310) - 1072387..1073451 (-) 1065 WP_000021293.1 MmcQ/YjbR family DNA-binding protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39032.17 Da        Isoelectric Point: 10.3950

>NTDB_id=325826 EGX70_RS05275 WP_123947986.1 1068269..1069342(-) (sepM) [Streptococcus sp. FDAARGOS_522]
MKNKDPKGKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=325826 EGX70_RS05275 WP_123947986.1 1068269..1069342(-) (sepM) [Streptococcus sp. FDAARGOS_522]
GTGAAGAATAAAGATCCAAAAGGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTTTCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCGGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.027

94.958

0.655


Multiple sequence alignment