Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | IHMA87_RS18695 | Genome accession | NZ_CP041354 |
| Coordinates | 3899549..3900145 (-) | Length | 198 a.a. |
| NCBI ID | WP_003153697.1 | Uniprot ID | A0A2R3IMG4 |
| Organism | Pseudomonas aeruginosa strain AZPAE15042 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3894549..3905145
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHMA87_RS18675 (IHMA87_03636) | - | 3895213..3896757 (+) | 1545 | WP_003153693.1 | flavin-containing monooxygenase | - |
| IHMA87_RS18680 (IHMA87_03637) | - | 3896754..3897641 (+) | 888 | WP_034078738.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| IHMA87_RS18685 (IHMA87_03638) | - | 3897715..3898254 (+) | 540 | WP_034078737.1 | CbrC family protein | - |
| IHMA87_RS18690 (IHMA87_03639) | - | 3898267..3899415 (-) | 1149 | WP_034078735.1 | acyl-CoA dehydrogenase family protein | - |
| IHMA87_RS18695 (IHMA87_03640) | recR | 3899549..3900145 (-) | 597 | WP_003153697.1 | recombination mediator RecR | Machinery gene |
| IHMA87_RS18700 (IHMA87_03641) | - | 3900225..3900551 (-) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| IHMA87_RS18705 (IHMA87_03642) | dnaX | 3900597..3902672 (-) | 2076 | WP_142821793.1 | DNA polymerase III subunit gamma/tau | - |
| IHMA87_RS18710 (IHMA87_03643) | - | 3902709..3903575 (+) | 867 | WP_034082341.1 | substrate-binding periplasmic protein | - |
| IHMA87_RS18720 (IHMA87_03645) | - | 3903828..3904205 (-) | 378 | WP_003150443.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21217.43 Da Isoelectric Point: 5.6328
>NTDB_id=325611 IHMA87_RS18695 WP_003153697.1 3899549..3900145(-) (recR) [Pseudomonas aeruginosa strain AZPAE15042]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELDARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
DRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELDARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
DRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=325611 IHMA87_RS18695 WP_003153697.1 3899549..3900145(-) (recR) [Pseudomonas aeruginosa strain AZPAE15042]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAGGGCG
TCGGTCACTGCCGGCAATGCCGTACCCTCAGCGAAGAGGAACTGTGCCCGCAGTGCGCGGATCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAGGGGCCGCTGGATGTGTTCGCCGTGGAACAGACCGGTTACCGTGGCCGCTATTTCGTGCTCAA
GGGTCATCTGTCGCCGCTCGACGGGCTGGGGCCGGAAGCGATCGGCATTCCCGAGCTGGACGCGAGGATCAGGGACGGCG
CCTTCAGCGAAGTGATCCTCGCCACCAACCCGACCGTGGAAGGCGAGGCCACCGCCCACTACATCGCGCAACTGTTGGCC
GATCGCGGCCTGACCCTGTCGCGCATCGCCCACGGCGTGCCGCTGGGCGGCGAGTTGGAGCTGGTCGATGGCGGCACCCT
GGCCCATGCCCTGGCCGGCCGCCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAGGGCG
TCGGTCACTGCCGGCAATGCCGTACCCTCAGCGAAGAGGAACTGTGCCCGCAGTGCGCGGATCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAGGGGCCGCTGGATGTGTTCGCCGTGGAACAGACCGGTTACCGTGGCCGCTATTTCGTGCTCAA
GGGTCATCTGTCGCCGCTCGACGGGCTGGGGCCGGAAGCGATCGGCATTCCCGAGCTGGACGCGAGGATCAGGGACGGCG
CCTTCAGCGAAGTGATCCTCGCCACCAACCCGACCGTGGAAGGCGAGGCCACCGCCCACTACATCGCGCAACTGTTGGCC
GATCGCGGCCTGACCCTGTCGCGCATCGCCCACGGCGTGCCGCTGGGCGGCGAGTTGGAGCTGGTCGATGGCGGCACCCT
GGCCCATGCCCTGGCCGGCCGCCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |