Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | FMA85_RS24325 | Genome accession | NZ_CP041337 |
| Coordinates | 5023418..5023933 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain CCUG 73778 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5018418..5028933
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FMA85_RS24280 (FMA85_24885) | csrA | 5019274..5019459 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| FMA85_RS24310 (FMA85_24915) | yqaB | 5020648..5021214 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| FMA85_RS24315 (FMA85_24920) | yqaA | 5021211..5021639 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| FMA85_RS24320 (FMA85_24925) | gshA | 5021712..5023268 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| FMA85_RS24325 (FMA85_24930) | luxS | 5023418..5023933 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| FMA85_RS24330 (FMA85_24935) | - | 5023984..5025096 (-) | 1113 | WP_000638136.1 | ATP-binding protein | - |
| FMA85_RS24335 (FMA85_24940) | - | 5025093..5025800 (-) | 708 | WP_001097132.1 | RNA ligase family protein | - |
| FMA85_RS24340 (FMA85_24945) | emrB | 5026058..5027596 (-) | 1539 | WP_001296316.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| FMA85_RS24345 (FMA85_24950) | emrA | 5027613..5028785 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=325558 FMA85_RS24325 WP_001130208.1 5023418..5023933(+) (luxS) [Escherichia coli strain CCUG 73778]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=325558 FMA85_RS24325 WP_001130208.1 5023418..5023933(+) (luxS) [Escherichia coli strain CCUG 73778]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |