Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   EGX83_RS13005 Genome accession   NZ_CP033768
Coordinates   2733800..2734684 (-) Length   294 a.a.
NCBI ID   WP_032059970.1    Uniprot ID   A0A009PAZ5
Organism   Acinetobacter baumannii strain FDAARGOS_533     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2728800..2739684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX83_RS12990 (EGX83_12990) miaB 2730647..2732098 (+) 1452 WP_031977696.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  EGX83_RS12995 (EGX83_12995) - 2732136..2733224 (+) 1089 WP_000122983.1 PhoH family protein -
  EGX83_RS13000 (EGX83_13000) ybeY 2733234..2733710 (+) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  EGX83_RS13005 (EGX83_13005) tonB2 2733800..2734684 (-) 885 WP_032059970.1 energy transducer TonB Machinery gene
  EGX83_RS13010 (EGX83_13010) - 2734915..2735586 (+) 672 WP_001193960.1 hypothetical protein -
  EGX83_RS13015 (EGX83_13015) - 2735744..2736457 (+) 714 WP_000201544.1 DUF3108 domain-containing protein -
  EGX83_RS13020 (EGX83_13020) - 2736530..2737105 (+) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  EGX83_RS13025 (EGX83_13025) wrbA 2737158..2737751 (-) 594 WP_001183355.1 NAD(P)H:quinone oxidoreductase -
  EGX83_RS13030 (EGX83_13030) - 2738039..2739286 (+) 1248 WP_032059968.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33678.55 Da        Isoelectric Point: 9.0556

>NTDB_id=325550 EGX83_RS13005 WP_032059970.1 2733800..2734684(-) (tonB2) [Acinetobacter baumannii strain FDAARGOS_533]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIYFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPTPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=325550 EGX83_RS13005 WP_032059970.1 2733800..2734684(-) (tonB2) [Acinetobacter baumannii strain FDAARGOS_533]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCTATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGAGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAACGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCAGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGCCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCGGAACTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009PAZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

99.32

100

0.993

Multiple sequence alignment