Detailed information NTG0325544

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EGX83_RS05350
• Genome accession: NZ_CP033768
• Coordinates: 1110711..1111412 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594585.1
• Uniprot ID: A0A009Q1Y5
• Organism: Acinetobacter baumannii strain FDAARGOS_533
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1105711..1116412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGX83_RS05315 (EGX83_05315)	kdsB	1106234..1106995 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EGX83_RS05320 (EGX83_05320)	-	1107007..1107987 (+)	981	WP_032058875.1	DNA polymerase III subunit delta'	-
EGX83_RS05325 (EGX83_05325)	-	1107999..1108340 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
EGX83_RS05330 (EGX83_05330)	-	1108358..1109131 (+)	774	WP_032058876.1	TatD family hydrolase	-
EGX83_RS05335 (EGX83_05335)	-	1109169..1109777 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EGX83_RS05340 (EGX83_05340)	-	1109787..1110341 (+)	555	WP_004841361.1	type II secretion system protein	-
EGX83_RS05345 (EGX83_05345)	xcpV	1110331..1110711 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EGX83_RS05350 (EGX83_05350)	xcpW	1110711..1111412 (+)	702	WP_000594585.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EGX83_RS05355 (EGX83_05355)	gspK	1111412..1112371 (+)	960	WP_031997570.1	type II secretion system minor pseudopilin GspK	-
EGX83_RS05360 (EGX83_05360)	-	1112601..1113197 (+)	597	WP_032058878.1	6-pyruvoyl trahydropterin synthase family protein	-
EGX83_RS05365 (EGX83_05365)	ung	1113248..1113961 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
EGX83_RS05370 (EGX83_05370)	-	1113958..1115082 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EGX83_RS05375 (EGX83_05375)	tadA	1115089..1115592 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
EGX83_RS05380 (EGX83_05380)	-	1115662..1116105 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26595.57 Da
• Isoelectric Point: 9.5501

>NTDB_id=325544 EGX83_RS05350 WP_000594585.1 1110711..1111412(+) (xcpW) [Acinetobacter baumannii strain FDAARGOS_533]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=325544 EGX83_RS05350 WP_000594585.1 1110711..1111412(+) (xcpW) [Acinetobacter baumannii strain FDAARGOS_533]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009Q1Y5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	100	100	1