Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EGX78_RS02490 Genome accession   NZ_CP033767
Coordinates   461003..461812 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_534     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 456003..466812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX78_RS02470 (EGX78_02475) - 456445..457692 (+) 1248 WP_002990679.1 AMP-binding protein -
  EGX78_RS02475 (EGX78_02480) - 457748..458782 (+) 1035 WP_002990676.1 DUF3114 domain-containing protein -
  EGX78_RS02480 (EGX78_02485) vicR 458944..459654 (+) 711 WP_002985645.1 response regulator YycF Regulator
  EGX78_RS02485 (EGX78_02490) vicK 459647..460999 (+) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EGX78_RS02490 (EGX78_02495) vicX 461003..461812 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  EGX78_RS02495 (EGX78_02500) rnc 462244..462936 (+) 693 WP_002990670.1 ribonuclease III -
  EGX78_RS02500 (EGX78_02505) smc 462937..466476 (+) 3540 WP_002990667.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=325509 EGX78_RS02490 WP_002985641.1 461003..461812(+) (vicX) [Streptococcus pyogenes strain FDAARGOS_534]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=325509 EGX78_RS02490 WP_002985641.1 461003..461812(+) (vicX) [Streptococcus pyogenes strain FDAARGOS_534]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment