Detailed information    

insolico Bioinformatically predicted

Overview


Name   pepF   Type   Regulator
Locus tag   EGX77_RS09710 Genome accession   NZ_CP033738
Coordinates   1907074..1908879 (+) Length   601 a.a.
NCBI ID   WP_012580891.1    Uniprot ID   A0A0E0UZ98
Organism   Listeria monocytogenes strain FDAARGOS_554     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context


Location: 1902074..1913879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX77_RS09685 (EGX77_09690) - 1902119..1903195 (+) 1077 WP_003722316.1 ABC transporter ATP-binding protein -
  EGX77_RS09690 (EGX77_09695) - 1903192..1904160 (+) 969 WP_003729595.1 ABC transporter ATP-binding protein -
  EGX77_RS09695 (EGX77_09700) spxA 1904479..1904874 (+) 396 WP_003720569.1 transcriptional regulator SpxA -
  EGX77_RS09700 (EGX77_09705) mecA 1905106..1905759 (+) 654 WP_003722314.1 adaptor protein MecA -
  EGX77_RS09705 (EGX77_09710) - 1905886..1907001 (+) 1116 WP_123810723.1 competence protein CoiA -
  EGX77_RS09710 (EGX77_09715) pepF 1907074..1908879 (+) 1806 WP_012580891.1 oligoendopeptidase F Regulator
  EGX77_RS09715 (EGX77_09720) - 1909178..1909438 (+) 261 WP_123810724.1 DUF3116 family protein -
  EGX77_RS09720 (EGX77_09725) isdC 1909649..1910275 (+) 627 WP_123810725.1 heme uptake protein IsdC -
  EGX77_RS09725 (EGX77_09730) hbp2 1910288..1911997 (+) 1710 WP_123810835.1 hemin/hemoglobin-binding protein Hbp2 -
  EGX77_RS09730 (EGX77_09735) isdE 1912084..1912956 (+) 873 WP_069008329.1 heme ABC transporter substrate-binding protein IsdE -

Sequence


Protein


Download         Length: 601 a.a.        Molecular weight: 68574.70 Da        Isoelectric Point: 4.5711

>NTDB_id=325292 EGX77_RS09710 WP_012580891.1 1907074..1908879(+) (pepF) [Listeria monocytogenes strain FDAARGOS_554]
MSKTNALPLREEVPENLTWDLTTIYPNDEAWEQAFTDLQKITEESEQFKGRLSESSQTLYEALQFRDNAYDLISNLYVYA
HLKMDQDTANAKYQGLHSRAGSLVTKLMSALSYYDPEILAMDESVLKQFLNENKDLQLYAHLLEELNLSRPYILSEKEEA
LLANAGEVLGSSSNTFNTLNNADMKFPTIKDENGEDIEITHGRFGKLLESNDPRVRREAFLGVYSVYEGLKNTLASTLNG
QVKKSNFYASTRGYTSAREAALSGNHIPETVYDSLLKSVNANADLLHRYVKLRKELLGLEELHMYDLYTPLSDDVNLEFT
YEEAKELVLEALKPLGDEYQAILKEAFDSRWIDVMENKGKRSGAYSSGSYSTNPYILLNWQDNINNVYTLAHELGHSVHS
YYTRKNQPFVYGDYSIFLAEVASTTNENLLTDYLLKKYEDPKVRAYLLNHYLDGFKGTVFRQTQFAEFEHAIHQADQQGV
ALTADFLTETYFDINKKYYGEAMVYDAEIGYEWSRIPHFYMNYYVFQYATGFSAASALSAKILTEGQEAVTAYIDFLKAG
SSDYPIDVLKKAGVDMATPNPVDDALKVFEQRLDELEKLVK

Nucleotide


Download         Length: 1806 bp        

>NTDB_id=325292 EGX77_RS09710 WP_012580891.1 1907074..1908879(+) (pepF) [Listeria monocytogenes strain FDAARGOS_554]
TTGAGTAAAACAAATGCATTACCTTTAAGAGAAGAAGTACCAGAAAATCTAACTTGGGATTTAACTACGATTTATCCAAA
TGATGAAGCTTGGGAACAAGCCTTTACAGATTTGCAAAAAATCACAGAAGAAAGCGAGCAATTTAAAGGGCGTTTATCGG
AAAGCAGCCAGACACTATATGAAGCACTTCAATTTCGAGATAATGCATATGATTTAATTAGTAACTTATATGTATATGCG
CATTTGAAAATGGATCAAGATACAGCTAATGCGAAATATCAAGGTTTACATAGTCGTGCAGGAAGCCTAGTTACAAAGCT
AATGTCTGCACTGTCTTATTATGATCCGGAAATTTTAGCTATGGACGAAAGTGTTTTAAAACAATTTTTAAATGAGAACA
AAGATTTACAATTATATGCGCATTTACTAGAAGAATTAAATTTAAGCCGACCGTATATTTTAAGTGAGAAAGAGGAGGCT
TTACTAGCTAACGCAGGTGAAGTGCTTGGAAGTTCGTCTAATACTTTTAATACCTTGAATAATGCAGATATGAAGTTTCC
AACCATTAAAGATGAGAACGGGGAAGATATCGAAATTACTCATGGTCGTTTCGGGAAATTGTTGGAAAGCAATGATCCAC
GTGTTCGTCGTGAAGCGTTTCTTGGTGTGTATTCTGTGTATGAAGGCCTAAAAAACACCTTAGCATCTACTTTAAATGGA
CAAGTGAAGAAGTCTAATTTTTATGCCTCTACTCGTGGCTACACGTCAGCTCGTGAAGCGGCTCTTTCTGGGAACCATAT
TCCTGAAACAGTATATGATTCGTTGCTAAAATCAGTAAATGCGAATGCAGATTTGCTTCATCGTTATGTGAAGTTGCGTA
AAGAATTACTTGGCTTAGAGGAATTGCATATGTATGATCTTTATACGCCACTTTCTGATGATGTTAATTTGGAGTTTACT
TATGAAGAAGCGAAAGAACTTGTGCTTGAAGCGCTTAAACCGCTTGGTGATGAATATCAAGCAATTTTAAAAGAAGCATT
TGATAGTCGTTGGATTGATGTTATGGAGAATAAAGGGAAACGTAGTGGAGCCTATTCATCTGGTTCATATAGTACGAATC
CTTATATTTTACTCAATTGGCAAGATAATATTAATAATGTTTATACACTTGCGCATGAATTAGGGCATAGTGTGCATAGT
TATTATACAAGAAAAAATCAACCTTTTGTTTATGGCGATTATTCGATTTTCTTGGCAGAAGTTGCTTCTACGACCAATGA
AAATCTGTTGACTGATTATCTGCTTAAGAAATATGAGGATCCTAAGGTACGTGCTTATTTGTTGAATCACTATTTGGATG
GATTCAAAGGGACTGTATTCCGCCAAACGCAATTTGCTGAATTTGAGCATGCAATTCATCAAGCCGATCAACAAGGTGTG
GCGCTGACTGCGGATTTCTTAACAGAAACATATTTTGATATTAATAAGAAATATTACGGAGAAGCGATGGTTTATGATGC
AGAAATTGGTTATGAATGGTCTCGTATTCCGCATTTTTATATGAATTATTATGTGTTCCAATATGCGACTGGTTTTTCTG
CAGCGTCTGCATTGAGTGCGAAGATTTTAACGGAAGGCCAAGAAGCGGTAACTGCCTATATTGATTTCTTGAAAGCGGGA
AGTTCGGATTATCCTATCGATGTGTTGAAAAAAGCAGGAGTTGATATGGCAACTCCTAATCCGGTGGATGATGCACTAAA
AGTATTTGAACAAAGATTAGATGAACTAGAAAAATTAGTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E0UZ98

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

51.351

98.502

0.506


Multiple sequence alignment