Detailed information NTG0325165

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: EGX58_RS09920
• Genome accession: NZ_CP033732
• Coordinates: 1958873..1961287 (+)
• Length: 804 a.a.
• NCBI ID: WP_103288200.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain FDAARGOS_575
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1953873..1966287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGX58_RS09890 (EGX58_09900)	cymR	1953880..1954302 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
EGX58_RS09895 (EGX58_09905)	-	1954412..1954555 (+)	144	WP_002448973.1	SAS049 family protein	-
EGX58_RS09900 (EGX58_09910)	-	1954654..1955658 (-)	1005	WP_002455251.1	LLM class flavin-dependent oxidoreductase	-
EGX58_RS09905 (EGX58_09915)	-	1955858..1956997 (+)	1140	WP_002455252.1	cysteine desulfurase family protein	-
EGX58_RS09910 (EGX58_09920)	mnmA	1957001..1958113 (+)	1113	WP_002455253.1	tRNA 2-thiouridine(34) synthase MnmA	-
EGX58_RS09915 (EGX58_09925)	-	1958200..1958871 (+)	672	WP_002488003.1	tetratricopeptide repeat protein	-
EGX58_RS09920 (EGX58_09930)	recD2	1958873..1961287 (+)	2415	WP_103288200.1	ATP-dependent RecD-like DNA helicase	Machinery gene
EGX58_RS09925 (EGX58_09935)	alaS	1961567..1964197 (+)	2631	WP_103288199.1	alanine--tRNA ligase	-
EGX58_RS09930 (EGX58_09940)	-	1964262..1964522 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
EGX58_RS09935 (EGX58_09945)	ruvX	1964523..1964951 (+)	429	WP_002455257.1	Holliday junction resolvase RuvX	-
EGX58_RS09940 (EGX58_09950)	-	1964966..1965274 (+)	309	WP_103288198.1	DUF1292 domain-containing protein	-
EGX58_RS09945 (EGX58_09955)	-	1965534..1966169 (+)	636	WP_002448992.1	O-methyltransferase	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 91431.99 Da
• Isoelectric Point: 4.8858

>NTDB_id=325165 EGX58_RS09920 WP_103288200.1 1958873..1961287(+) (recD2) [Staphylococcus hominis strain FDAARGOS_575]
MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDYIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKTKQKQIVEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKVLENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQQQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRINTYKNHFKII
EQSDLQIHIGELEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHESIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLIVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEKNDEQINIDDNNAVEHITLSEETIYQINPMINMGNVSPYD
FVEH

Nucleotide

• Length: 2415 bp

>NTDB_id=325165 EGX58_RS09920 WP_103288200.1 1958873..1961287(+) (recD2) [Staphylococcus hominis strain FDAARGOS_575]
ATGTCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTACATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAATTGCCTCAAACTAAAGATGCCATTATAAGTTATTTATCTAGTGACTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTTGAAA
ATGTTCCTAGTTTAGCAAAAACGAAACAAAAACAGATTGTAGAACAGATTAGTGCAAATCAAGAGTCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCTATGGCGATTTATCAATTCTATCAATCAGAGACTTTAAAAGT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGATTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGATTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGG
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAACAACAATTAAAACATGTACTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAACACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAACTAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTGACTGGAGGGCCAGGAACAGGTAAGACAACTGTTATTAAAGGGA
TTGTAGAATTATATGCTGAAATTCATGGTCTATCTCTTAAGTATTCTGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGAGCATCAAAGCGTTTACAAGAATCAACTGGCTTAGAGGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAGAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCACCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATCATTCTAGTAGGGGATGAAGAT
CAATTGCCATCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCTTTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGCATTATTGACTTAGCTCATCGCATGAAACATCATGAGTCAATAGATATTACAA
AACGTTATCATGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACTGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAACAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAAAGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTCAATCGACCAAATGATAATATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTC
TGGGCTAAAGAAAATGCACTTAACAAAGATGTACTGATTGTCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGGTCAGAATTTCCTATTGTTATTATGCCTA
TTGTTAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGACCCAAAGGCATTTGACATTGCCTTAAATACGCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGACGTAGAAAAGAATGATGAACAGATAAATATAGATGATAATAATGCAG
TTGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCACCTTACGAC
TTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• AAA domain (AAA_30) (340-545)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.438	99.627	0.493