Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   BLCSL_RS16770 Genome accession   NZ_CP041154
Coordinates   3191411..3191884 (-) Length   157 a.a.
NCBI ID   WP_003184615.1    Uniprot ID   Q65FU5
Organism   Bacillus licheniformis strain CSL2     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3186411..3196884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLCSL_RS16730 (BLCSL_16730) - 3186924..3187712 (+) 789 WP_003184598.1 ABC transporter ATP-binding protein -
  BLCSL_RS16735 (BLCSL_16735) - 3187675..3188499 (+) 825 WP_140991827.1 ABC transporter permease -
  BLCSL_RS16740 (BLCSL_16740) ytkD 3188530..3189006 (-) 477 WP_003184602.1 RNA deprotection pyrophosphohydrolase -
  BLCSL_RS16745 (BLCSL_16745) - 3189201..3189524 (-) 324 WP_003184604.1 hypothetical protein -
  BLCSL_RS16750 (BLCSL_16750) - 3189572..3189976 (-) 405 WP_003184607.1 holin family protein -
  BLCSL_RS16755 (BLCSL_16755) - 3190128..3190565 (-) 438 WP_003184609.1 Dps family protein -
  BLCSL_RS16760 (BLCSL_16760) ytzI 3190699..3190842 (+) 144 WP_003184611.1 YtzI protein -
  BLCSL_RS16765 (BLCSL_16765) - 3190836..3191279 (-) 444 WP_003184613.1 FixH family protein -
  BLCSL_RS16770 (BLCSL_16770) luxS 3191411..3191884 (-) 474 WP_003184615.1 S-ribosylhomocysteine lyase Regulator
  BLCSL_RS16775 (BLCSL_16775) yidD 3192022..3192249 (+) 228 WP_003184617.1 membrane protein insertion efficiency factor YidD -
  BLCSL_RS16780 (BLCSL_16780) - 3192246..3192815 (-) 570 WP_003184618.1 carbonic anhydrase -
  BLCSL_RS16785 (BLCSL_16785) - 3192942..3194123 (+) 1182 WP_003184620.1 GTP-binding protein -
  BLCSL_RS16790 (BLCSL_16790) - 3194222..3195253 (+) 1032 WP_009329427.1 metal ABC transporter solute-binding protein, Zn/Mn family -
  BLCSL_RS16795 (BLCSL_16795) - 3195339..3195584 (-) 246 WP_003184624.1 type B 50S ribosomal protein L31 -

Sequence

Protein


Download         Length: 157 a.a.        Molecular weight: 17885.47 Da        Isoelectric Point: 5.5531

>NTDB_id=324983 BLCSL_RS16770 WP_003184615.1 3191411..3191884(-) (luxS) [Bacillus licheniformis strain CSL2]
MPSVESFELDHNAVKAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRTYAEKYDHFDIIDIS
PMGCQTGYYLVVSGEPKVEEIVDLLEDTFKEAVEVTEIPAANEKQCGQAKLHDLEGAKRMMRFWLSQNKEDLLKVFG

Nucleotide


Download         Length: 474 bp        

>NTDB_id=324983 BLCSL_RS16770 WP_003184615.1 3191411..3191884(-) (luxS) [Bacillus licheniformis strain CSL2]
ATGCCTTCAGTTGAAAGTTTTGAGCTTGACCATAATGCGGTAAAAGCGCCTTATGTCAGACACTGCGGCGTCCACAAAGT
GGGAACGGACGGCGTCGTCAACAAGTTTGACATCCGTTTTTGCCAGCCGAATAAACAGGCAATGAAACCTGATACGATTC
ATACTTTAGAGCACCTTCTTGCATTTACAATCCGCACATATGCGGAAAAATATGACCACTTTGATATTATCGACATTTCG
CCGATGGGCTGCCAAACGGGCTATTACCTGGTGGTAAGCGGTGAGCCGAAAGTGGAAGAAATCGTTGATTTGCTTGAGGA
TACGTTCAAAGAAGCCGTTGAAGTGACTGAAATTCCTGCGGCTAACGAAAAACAGTGCGGCCAGGCAAAGCTTCACGATC
TTGAAGGCGCAAAGCGCATGATGCGTTTTTGGCTTTCGCAAAATAAAGAAGACCTGCTCAAGGTGTTTGGGTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-150)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65FU5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

35.802

100

0.369