Detailed information NTG0324953

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BLCSL_RS13155
• Genome accession: NZ_CP041154
• Coordinates: 2506982..2508112 (-)
• Length: 376 a.a.
• NCBI ID: WP_009327959.1
• Uniprot ID: Q65HV9
• Organism: Bacillus licheniformis strain CSL2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2501982..2513112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLCSL_RS13135 (BLCSL_13135)	-	2503171..2503515 (-)	345	WP_003183123.1	hypothetical protein	-
BLCSL_RS13140 (BLCSL_13140)	-	2503778..2505964 (-)	2187	WP_003183125.1	RNA ligase	-
BLCSL_RS13145 (BLCSL_13145)	-	2506091..2506528 (-)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
BLCSL_RS13150 (BLCSL_13150)	-	2506687..2506992 (-)	306	WP_003183128.1	hypothetical protein	-
BLCSL_RS13155 (BLCSL_13155)	rapC	2506982..2508112 (-)	1131	WP_009327959.1	Rap family tetratricopeptide repeat protein	Regulator
BLCSL_RS13160 (BLCSL_13160)	-	2508343..2508780 (-)	438	WP_003183133.1	peptidylprolyl isomerase	-
BLCSL_RS13165 (BLCSL_13165)	-	2508910..2510013 (+)	1104	WP_003183136.1	DUF1002 domain-containing protein	-
BLCSL_RS13170 (BLCSL_13170)	-	2510010..2510870 (-)	861	WP_003183139.1	poly-gamma-glutamate hydrolase family protein	-
BLCSL_RS13175 (BLCSL_13175)	lysA	2511109..2512428 (-)	1320	WP_003183141.1	diaminopimelate decarboxylase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44264.11 Da
• Isoelectric Point: 4.7199

>NTDB_id=324953 BLCSL_RS13155 WP_009327959.1 2506982..2508112(-) (rapC) [Bacillus licheniformis strain CSL2]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=324953 BLCSL_RS13155 WP_009327959.1 2506982..2508112(-) (rapC) [Bacillus licheniformis strain CSL2]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCATATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (260-290)

• Tetratricopeptide repeat (TPR_12) (190-252)

3D structure

• AlphaFold DB: Q65HV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.745	100	0.479
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452