Detailed information NTG0324928

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BLCSL_RS08880
• Genome accession: NZ_CP041154
• Coordinates: 1732101..1733087 (+)
• Length: 328 a.a.
• NCBI ID: WP_003181713.1
• Uniprot ID: Q65JQ3
• Organism: Bacillus licheniformis strain CSL2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1727101..1738087

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLCSL_RS08865 (BLCSL_08865)	acpP	1727300..1727533 (+)	234	WP_003181706.1	acyl carrier protein	-
BLCSL_RS08870 (BLCSL_08870)	rnc	1727675..1728424 (+)	750	WP_009328527.1	ribonuclease III	-
BLCSL_RS08875 (BLCSL_08875)	smc	1728524..1732084 (+)	3561	WP_026699221.1	chromosome segregation protein SMC	-
BLCSL_RS08880 (BLCSL_08880)	pilA	1732101..1733087 (+)	987	WP_003181713.1	signal recognition particle-docking protein FtsY	Machinery gene
BLCSL_RS08885 (BLCSL_08885)	-	1733221..1733544 (+)	324	WP_003181715.1	putative DNA-binding protein	-
BLCSL_RS08890 (BLCSL_08890)	ffh	1733560..1734900 (+)	1341	WP_003181717.1	signal recognition particle protein	-
BLCSL_RS08895 (BLCSL_08895)	rpsP	1735008..1735280 (+)	273	WP_003181719.1	30S ribosomal protein S16	-
BLCSL_RS08900 (BLCSL_08900)	-	1735280..1735525 (+)	246	WP_003181721.1	KH domain-containing protein	-
BLCSL_RS08905 (BLCSL_08905)	-	1735663..1736049 (+)	387	WP_003181722.1	YlqD family protein	-
BLCSL_RS08910 (BLCSL_08910)	rimM	1736054..1736578 (+)	525	WP_003181725.1	ribosome maturation factor RimM	-
BLCSL_RS08915 (BLCSL_08915)	trmD	1736575..1737306 (+)	732	WP_003181726.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
BLCSL_RS08920 (BLCSL_08920)	rplS	1737445..1737792 (+)	348	WP_003181728.1	50S ribosomal protein L19	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 36247.39 Da
• Isoelectric Point: 4.8125

>NTDB_id=324928 BLCSL_RS08880 WP_003181713.1 1732101..1733087(+) (pilA) [Bacillus licheniformis strain CSL2]
MSFFKKLKEKITQQTDSVSGKFKEGLAKTRNTFQERVNELVSRYRKVDEDFFEELEEVLIGADVGVATVMELIDELKSEV
KRRNIQDPKEVQSVISEKLVEIYEGGEQEASELRVEDGRLNIILFVGVNGVGKTTTIGKLAHQFIKEGKNVVLAAGDTFR
AGAIDQLEVWGERVGAHVVKQAEGSDPAAVIYDAVQAAKARGADVLLCDTAGRLQNKVNLMKELEKVKRVIQREVPDAPH
EVLLVLDATTGQNAMTQAREFSKATDVSGIVLTKLDGTAKGGIVLAIRHELQIPVKFVGLGEKMDDLQPFEAESYVYGLF
SDLIEKEE

Nucleotide

• Length: 987 bp

>NTDB_id=324928 BLCSL_RS08880 WP_003181713.1 1732101..1733087(+) (pilA) [Bacillus licheniformis strain CSL2]
ATGAGCTTTTTTAAAAAACTGAAAGAAAAAATCACACAGCAGACCGATTCGGTCTCAGGCAAATTTAAAGAAGGCCTGGC
GAAAACGAGAAATACGTTTCAGGAGCGGGTCAATGAGCTTGTCTCCCGCTACCGGAAAGTGGACGAGGATTTTTTTGAAG
AGCTTGAAGAGGTTCTGATCGGCGCTGATGTCGGCGTTGCGACTGTTATGGAGCTGATTGACGAGCTGAAGAGCGAGGTC
AAGCGAAGAAATATTCAGGACCCGAAAGAGGTGCAGTCCGTCATTTCTGAAAAGCTCGTTGAAATCTATGAAGGCGGGGA
GCAGGAAGCATCAGAGCTCCGCGTCGAAGACGGCCGCCTAAACATCATTTTATTCGTCGGCGTCAACGGCGTCGGCAAAA
CGACGACGATCGGCAAGCTTGCCCATCAATTCATTAAAGAAGGCAAAAATGTCGTTCTTGCTGCCGGAGATACATTCAGG
GCCGGCGCGATCGACCAGCTTGAAGTGTGGGGAGAGCGCGTCGGCGCGCATGTCGTCAAACAGGCGGAAGGCTCGGATCC
TGCGGCTGTTATCTATGACGCCGTTCAAGCCGCGAAAGCGCGCGGCGCCGATGTCCTGCTTTGCGACACGGCAGGACGCC
TGCAAAATAAAGTGAACTTAATGAAAGAGCTAGAAAAGGTAAAGCGCGTGATTCAGCGCGAAGTGCCTGATGCGCCTCAT
GAAGTGCTGCTCGTACTGGATGCGACGACAGGGCAGAACGCAATGACACAGGCGCGCGAATTTTCCAAAGCGACTGATGT
CTCAGGCATCGTGCTGACGAAGCTCGACGGAACGGCAAAAGGCGGCATCGTCCTCGCCATCCGCCATGAGCTGCAGATTC
CGGTCAAGTTTGTCGGGCTGGGGGAAAAAATGGATGACCTGCAGCCGTTTGAAGCAGAGTCATATGTATACGGCCTGTTT
TCCGATCTGATCGAGAAAGAAGAGTAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: Q65JQ3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	44.04	92.073	0.405