Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   BLCSL_RS06310 Genome accession   NZ_CP041154
Coordinates   1254866..1256014 (+) Length   382 a.a.
NCBI ID   WP_009328825.1    Uniprot ID   Q65LB1
Organism   Bacillus licheniformis strain CSL2     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1249866..1261014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLCSL_RS06290 (BLCSL_06290) - 1250414..1250869 (+) 456 WP_009328829.1 tripartite tricarboxylate transporter TctB family protein -
  BLCSL_RS06295 (BLCSL_06295) - 1250892..1252394 (+) 1503 WP_017474220.1 tripartite tricarboxylate transporter permease -
  BLCSL_RS06300 (BLCSL_06300) - 1252414..1253130 (-) 717 WP_140991792.1 response regulator -
  BLCSL_RS06305 (BLCSL_06305) - 1253153..1254748 (-) 1596 WP_009328826.1 sensor histidine kinase -
  BLCSL_RS06310 (BLCSL_06310) coiA 1254866..1256014 (+) 1149 WP_009328825.1 competence protein CoiA family protein Machinery gene
  BLCSL_RS06315 (BLCSL_06315) pepF 1256227..1258056 (+) 1830 WP_282334326.1 oligoendopeptidase F Regulator
  BLCSL_RS22770 - 1258113..1258280 (-) 168 WP_009328823.1 hypothetical protein -
  BLCSL_RS06320 (BLCSL_06320) spxH 1258692..1259594 (-) 903 WP_075178130.1 protease adaptor protein SpxH -
  BLCSL_RS06325 (BLCSL_06325) - 1259591..1259989 (-) 399 WP_003180652.1 thiol management oxidoreductase -
  BLCSL_RS06330 (BLCSL_06330) - 1260271..1260924 (-) 654 WP_011197774.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 44647.01 Da        Isoelectric Point: 9.9815

>NTDB_id=324913 BLCSL_RS06310 WP_009328825.1 1254866..1256014(+) (coiA) [Bacillus licheniformis strain CSL2]
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLY
EWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQ
LSRFHWQFIQKSDKPPKLLFFCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFITKHDTFRLQSALHYMDWLIKG
KRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSAGSFVPEPRLEALLKRDEHYFSE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=324913 BLCSL_RS06310 WP_009328825.1 1254866..1256014(+) (coiA) [Bacillus licheniformis strain CSL2]
ATGTTCAGTGCAATGATCGATCAAGGCGGGACCATCTGCCTTGCCGACGGATACAAAGCCGAAGATCTCAAGCGATTGAG
AAAAAGACATGCATTTTACTGCCCGGTGTGCCGGTGTGAACTCGACCTGAAAATCGGTTCCGTCAAGCTTCCGCATTTCG
CTCATAAGCCGGATGCAGCATGTCCGGTGCCCCATGAACCGGAGAGCCCCTATCACCTGAAAGGAAAGCGGCTGTTGTAC
GAATGGCTTGGCAGACAAGGACTCCGCCCGGTGCTTGAACCGTATTTGCAAGAGATCAGACAAAGGCCCGATTTGCTGCT
GGAACACGGAACCCGCCAGGTTGCGGTTGAATTTCAATGTGCGAATCTCAATGCCGCAGCGTATCGCAAAAGGACCGAAG
GCTTTCTCAGACTGGGAATCGAGCCCGTATGGATTCTCGGCGGAAACCGGATAAAACGCTTGACGGGGGATTTATTTCAG
CTTTCGCGGTTTCACTGGCAGTTCATTCAGAAAAGCGACAAGCCCCCAAAGCTCCTGTTTTTTTGCCCCGAACAAAAGGC
TTTCATCATCCTCGAACACCTCATTCCCTTTCAAACAAACAAAACATCCGCATCCTTGCGCTTTCTTCCTCTTGCTGAAG
CAAGCTGGCGTAATGTAACAGAACGAGAAAGCCGTTCGCCTCTCCAGCTCAAAGGCTGGAAAAAGAACATCCTCAGCTTT
CGGATGTCGGCCGTGCGTTTTTTATCAAAAGAAACGAAGCAGATTGCCGCCCTCTTTTATGAAAATCATCAGCTTCCGCT
CCCGTTTTTTCCCTCAGAAGCCTTTCTCCCGGTGCCGTCAGGCTATATTTTTGCCCACCCGGTTTATGTATGGCAAGGGT
ACCTTTTTTTATTTATAACGAAGCATGATACATTTCGCCTGCAGTCTGCGCTTCACTATATGGACTGGCTCATCAAGGGC
AAAAGGCTGAAGCTGAGATGGAGCGGGCGGCAAACGGCTGCGGATGCCGTCGGTGAATACATTTGTTTTTTGCATAAAAA
AGGATTTTTGGTGAGGAAAGAGGAATTTTATTATTCCGCGGGTTCTTTTGTTCCGGAGCCGCGGTTAGAGGCGCTGTTAA
AAAGGGATGAACATTATTTTTCCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65LB1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

42.308

95.288

0.403