Detailed information NTG0324895

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BLCSL_RS05340
• Genome accession: NZ_CP041154
• Coordinates: 1056342..1057460 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain CSL2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1051342..1062460

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLCSL_RS05315 (BLCSL_05315)	-	1051544..1053049 (+)	1506	WP_020450779.1	coproporphyrinogen III oxidase	-
BLCSL_RS05320 (BLCSL_05320)	-	1053129..1054340 (-)	1212	WP_016886432.1	cation:proton antiporter	-
BLCSL_RS05325 (BLCSL_05325)	-	1054347..1054844 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
BLCSL_RS05330 (BLCSL_05330)	-	1054909..1055238 (-)	330	WP_016886161.1	hypothetical protein	-
BLCSL_RS05335 (BLCSL_05335)	-	1055439..1056215 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
BLCSL_RS05340 (BLCSL_05340)	rapC	1056342..1057460 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
BLCSL_RS22375	-	1057450..1057587 (+)	138	WP_016886158.1	hypothetical protein	-
BLCSL_RS05345 (BLCSL_05345)	-	1057592..1057870 (+)	279	WP_003180226.1	hypothetical protein	-
BLCSL_RS05350 (BLCSL_05350)	-	1057945..1058130 (-)	186	WP_003180228.1	YhzD family protein	-
BLCSL_RS05355 (BLCSL_05355)	-	1058248..1059144 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
BLCSL_RS05360 (BLCSL_05360)	-	1059137..1060405 (+)	1269	WP_003180232.1	ABC transporter permease	-
BLCSL_RS05365 (BLCSL_05365)	-	1060525..1061751 (+)	1227	WP_009328954.1	DNA repair exonuclease	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=324895 BLCSL_RS05340 WP_009328956.1 1056342..1057460(+) (rapC) [Bacillus licheniformis strain CSL2]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=324895 BLCSL_RS05340 WP_009328956.1 1056342..1057460(+) (rapC) [Bacillus licheniformis strain CSL2]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374