Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   FIV54_RS07410 Genome accession   NZ_CP041037
Coordinates   1458130..1458753 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain NP66     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1453130..1463753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIV54_RS07380 (FIV54_07390) - 1454103..1454570 (-) 468 WP_000966142.1 CcdC family protein -
  FIV54_RS07385 (FIV54_07395) - 1454664..1454762 (-) 99 WP_031866183.1 hypothetical protein -
  FIV54_RS07390 (FIV54_07400) - 1454749..1454991 (-) 243 WP_000246909.1 YneF family protein -
  FIV54_RS07395 (FIV54_07405) recP/tkt 1455269..1457257 (-) 1989 WP_000481451.1 transketolase Machinery gene
  FIV54_RS07400 (FIV54_07410) - 1457378..1457617 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  FIV54_RS07405 (FIV54_07415) sosA 1457754..1457987 (-) 234 WP_000499650.1 DNA damage-induced cell division inhibitor SosA -
  FIV54_RS07410 (FIV54_07420) dinR/lexA 1458130..1458753 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  FIV54_RS07415 (FIV54_07425) - 1459133..1460149 (-) 1017 WP_170961871.1 CAP domain-containing protein -
  FIV54_RS07425 (FIV54_07435) guaC 1460171..1461148 (-) 978 WP_000688122.1 GMP reductase -
  FIV54_RS07430 (FIV54_07440) rpsN 1461305..1461574 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  FIV54_RS07435 (FIV54_07445) rpmG 1462028..1462177 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=324677 FIV54_RS07410 WP_001208755.1 1458130..1458753(+) (dinR/lexA) [Staphylococcus aureus strain NP66]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=324677 FIV54_RS07410 WP_001208755.1 1458130..1458753(+) (dinR/lexA) [Staphylococcus aureus strain NP66]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657