Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   SMUNN2025_RS05315 Genome accession   NC_013928
Coordinates   1075752..1076714 (-) Length   320 a.a.
NCBI ID   WP_002270387.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1070752..1081714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS05285 (SmuNN2025_1021) dprA 1071632..1072398 (-) 767 Protein_1011 DNA-processing protein DprA -
  SMUNN2025_RS05295 (SmuNN2025_1024) - 1072565..1072846 (-) 282 WP_002262863.1 hypothetical protein -
  SMUNN2025_RS05300 (SmuNN2025_1025) - 1072917..1073933 (-) 1017 WP_002283153.1 siderophore ABC transporter substrate-binding protein -
  SMUNN2025_RS05305 (SmuNN2025_1026) - 1073981..1074787 (-) 807 WP_002262861.1 ABC transporter ATP-binding protein -
  SMUNN2025_RS05310 (SmuNN2025_1027) - 1074784..1075755 (-) 972 WP_002285805.1 iron chelate uptake ABC transporter family permease subunit -
  SMUNN2025_RS05315 (SmuNN2025_1028) ceuB 1075752..1076714 (-) 963 WP_002270387.1 ABC transporter permease Machinery gene
  SMUNN2025_RS05320 (SmuNN2025_1029) - 1076887..1077669 (-) 783 WP_002277969.1 ribonuclease HII -
  SMUNN2025_RS05325 (SmuNN2025_1030) ylqF 1077656..1078507 (-) 852 WP_002270386.1 ribosome biogenesis GTPase YlqF -
  SMUNN2025_RS05330 (SmuNN2025_1031) - 1078704..1079669 (-) 966 WP_012997794.1 hypothetical protein -
  SMUNN2025_RS05335 (SmuNN2025_1032) - 1079955..1080293 (-) 339 WP_002262855.1 ATP cone domain-containing protein -
  SMUNN2025_RS05340 (SmuNN2025_1033) dapA 1080601..1081482 (-) 882 WP_002262854.1 4-hydroxy-tetrahydrodipicolinate synthase -

Sequence


Protein


Download         Length: 320 a.a.        Molecular weight: 34979.24 Da        Isoelectric Point: 9.8764

>NTDB_id=32418 SMUNN2025_RS05315 WP_002270387.1 1075752..1076714(-) (ceuB) [Streptococcus mutans NN2025]
MKKVLTVPVLGAAAVFLSLVSIFIGVKSLSLFELGSLDDSQLNILLSSRIPRTVSILIAGSSLAVCGLIMQQLTQNKFVS
PTTAGTMDWAKLGVVVTIILFSKSSLLLQLIISSVFVIFGSLFFIYLLKVIKFKDDVFIPLVGLMLGKVVSAISTFLGVQ
FQILQSVNSWLEGHFSIMTSHRYEILFLVLPCMVLIYLYAHQFTIAGLGEDFSKNLGLNYQFIINLGLVIVSVMTAIIVT
VVGSLPFLGLIVPNSISAIKGDNMKNNLILTSFLGAVIVLICDIFGRLVIFPYEVSIGLTMGIIGSIFFLYFLMKGRRRS

Nucleotide


Download         Length: 963 bp        

>NTDB_id=32418 SMUNN2025_RS05315 WP_002270387.1 1075752..1076714(-) (ceuB) [Streptococcus mutans NN2025]
ATGAAAAAAGTACTCACTGTTCCAGTGCTGGGTGCAGCTGCAGTCTTTCTTTCTCTCGTTTCAATATTTATCGGTGTTAA
GAGTCTATCGCTTTTTGAACTGGGCTCTTTAGACGATTCACAACTTAACATTTTATTATCTAGTCGCATTCCTAGAACGG
TTAGTATTTTAATTGCTGGCTCTAGTTTAGCCGTTTGTGGTTTAATTATGCAGCAATTAACGCAAAATAAATTTGTCTCA
CCGACAACGGCTGGGACAATGGATTGGGCAAAGCTAGGTGTTGTTGTCACTATTATCTTATTTAGTAAATCTTCTTTACT
ATTACAGTTGATTATTTCATCGGTCTTTGTCATTTTTGGTTCTTTGTTTTTTATCTATCTTTTAAAGGTTATTAAATTTA
AGGATGATGTTTTCATTCCTCTAGTAGGTCTGATGTTGGGGAAAGTTGTATCTGCAATCAGTACTTTTTTAGGAGTACAG
TTTCAGATATTGCAGTCTGTCAACAGTTGGTTAGAAGGTCATTTTTCCATCATGACTTCTCATCGATATGAGATTTTATT
TTTGGTGCTGCCTTGCATGGTATTAATTTACCTTTATGCTCATCAGTTTACTATAGCTGGCTTGGGAGAAGATTTTTCTA
AAAATCTAGGTTTGAATTATCAATTTATTATTAATTTAGGCTTGGTTATTGTTTCGGTTATGACAGCTATCATTGTAACA
GTTGTTGGCAGTCTTCCTTTTTTAGGTTTGATTGTTCCTAATTCGATTTCTGCTATCAAGGGCGACAATATGAAGAACAA
CTTAATATTAACCTCTTTTTTAGGTGCTGTTATTGTGCTTATTTGTGATATTTTTGGACGTCTTGTTATTTTTCCTTATG
AAGTTTCTATTGGATTGACTATGGGAATAATAGGAAGTATCTTTTTTCTTTATTTTTTGATGAAGGGAAGAAGGCGTTCA
TGA

Domains


Predicted by InterProScan.

(15-315)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

46.395

99.688

0.463


Multiple sequence alignment