Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   BCG9842_RS14050 Genome accession   NC_011772
Coordinates   2791807..2792088 (-) Length   93 a.a.
NCBI ID   WP_000843023.1    Uniprot ID   -
Organism   Bacillus cereus G9842     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 2786807..2797088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCG9842_RS14020 - 2787806..2788186 (-) 381 WP_000196740.1 hypothetical protein -
  BCG9842_RS14025 (BCG9842_B2380) - 2788678..2789082 (-) 405 WP_000282650.1 hypothetical protein -
  BCG9842_RS14030 (BCG9842_B2379) - 2789442..2790209 (-) 768 WP_000180533.1 hypothetical protein -
  BCG9842_RS14035 (BCG9842_B2378) - 2790375..2790557 (-) 183 WP_001106359.1 DUF6877 family protein -
  BCG9842_RS14040 (BCG9842_B2377) - 2790681..2791406 (+) 726 WP_000172502.1 hypothetical protein -
  BCG9842_RS31930 - 2791617..2791805 (-) 189 Protein_2765 hypothetical protein -
  BCG9842_RS14050 (BCG9842_B2375) abrB 2791807..2792088 (-) 282 WP_000843023.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  BCG9842_RS14055 (BCG9842_B2374) - 2792215..2792361 (-) 147 WP_000790089.1 BC1881 family protein -
  BCG9842_RS28985 - 2792364..2793216 (-) 853 Protein_2768 hypothetical protein -
  BCG9842_RS14070 (BCG9842_B2371) - 2793233..2793550 (-) 318 WP_000805620.1 hypothetical protein -
  BCG9842_RS14075 (BCG9842_B2370) - 2794726..2794965 (-) 240 WP_015945821.1 hypothetical protein -
  BCG9842_RS14080 (BCG9842_B2369) - 2794990..2796024 (-) 1035 Protein_2771 CocE/NonD family hydrolase -

Sequence

Protein


Download         Length: 93 a.a.        Molecular weight: 10233.80 Da        Isoelectric Point: 4.6258

>NTDB_id=32409 BCG9842_RS14050 WP_000843023.1 2791807..2792088(-) (abrB) [Bacillus cereus G9842]
MKSTGIIRNIDPLGRIVVPMELRRTLGIQIKDSMEIFVDGESIILQKYNSNNSCQITGEVSEENIEIAGGKLVLSPEGID
QVLAEIEAHLKGR

Nucleotide


Download         Length: 282 bp        

>NTDB_id=32409 BCG9842_RS14050 WP_000843023.1 2791807..2792088(-) (abrB) [Bacillus cereus G9842]
ATGAAATCGACAGGTATTATTCGTAACATTGATCCATTAGGACGAATTGTGGTTCCAATGGAATTACGCCGCACATTAGG
TATCCAGATAAAGGATTCGATGGAGATTTTCGTAGATGGTGAATCTATTATTCTACAAAAATATAACTCTAATAACTCTT
GCCAAATTACAGGAGAGGTTTCAGAAGAAAACATTGAAATAGCTGGCGGTAAACTCGTGCTGAGTCCTGAAGGGATTGAT
CAGGTATTAGCGGAAATTGAAGCGCATTTGAAGGGGCGATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(54-89)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(14-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

61.538

97.849

0.602

Multiple sequence alignment