Detailed information    

insolico Bioinformatically predicted

Overview


Name   abrB   Type   Regulator
Locus tag   BCG9842_RS11590 Genome accession   NC_011772
Coordinates   2296613..2296891 (+) Length   92 a.a.
NCBI ID   WP_000842215.1    Uniprot ID   B7IX47
Organism   Bacillus cereus G9842     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context


Location: 2291613..2301891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCG9842_RS11570 (BCG9842_B2887) - 2293384..2294193 (+) 810 WP_000678376.1 papain-like cysteine protease family protein -
  BCG9842_RS11575 (BCG9842_B2886) - 2294219..2294824 (+) 606 WP_000527414.1 hypothetical protein -
  BCG9842_RS11580 (BCG9842_B2885) - 2294965..2295216 (-) 252 WP_000821942.1 response regulator transcription factor -
  BCG9842_RS11585 (BCG9842_B2884) - 2295594..2296472 (+) 879 WP_000397978.1 helix-turn-helix domain-containing protein -
  BCG9842_RS11590 (BCG9842_B2883) abrB 2296613..2296891 (+) 279 WP_000842215.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  BCG9842_RS11595 (BCG9842_B2882) - 2297503..2298753 (+) 1251 WP_001032355.1 hypothetical protein -
  BCG9842_RS11600 (BCG9842_B2881) - 2298821..2299579 (+) 759 WP_000347991.1 TSUP family transporter -
  BCG9842_RS11605 (BCG9842_B2880) - 2299832..2300491 (+) 660 WP_000682536.1 CatB-related O-acetyltransferase -

Sequence


Protein


Download         Length: 92 a.a.        Molecular weight: 10378.17 Da        Isoelectric Point: 9.6547

>NTDB_id=32406 BCG9842_RS11590 WP_000842215.1 2296613..2296891(+) (abrB) [Bacillus cereus G9842]
MKSRGITRKADSMGRIVIPMEIRRSLGIVEKDSLEMFIEEDQIILRKYQSPRACALTGDISDSNISLANGKIIVSPEGTE
QLIKKLQQYLLK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=32406 BCG9842_RS11590 WP_000842215.1 2296613..2296891(+) (abrB) [Bacillus cereus G9842]
ATGAAATCAAGAGGGATTACTCGTAAAGCAGATAGCATGGGGCGTATTGTTATTCCAATGGAAATAAGACGGAGTTTAGG
AATTGTAGAAAAAGATTCTCTTGAAATGTTTATAGAAGAGGATCAGATTATTTTACGAAAATATCAATCTCCAAGAGCTT
GTGCACTTACAGGTGATATTTCAGACAGCAATATTTCGTTAGCGAATGGGAAGATTATTGTAAGTCCAGAGGGGACGGAA
CAATTAATAAAGAAGTTACAGCAATATCTTTTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB B7IX47

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

52.222

97.826

0.511


Multiple sequence alignment