Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EEB07_RS10150 | Genome accession | NZ_CP033576 |
| Coordinates | 1950404..1950694 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain NY12-2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1945404..1955694
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEB07_RS10110 (EEB07_10110) | darA | 1945421..1945750 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| EEB07_RS10115 (EEB07_10115) | - | 1945763..1946203 (+) | 441 | WP_004264730.1 | DUF327 family protein | - |
| EEB07_RS10120 (EEB07_10120) | holB | 1946215..1947204 (+) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| EEB07_RS10125 (EEB07_10125) | ricT | 1947207..1948034 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| EEB07_RS10130 (EEB07_10130) | yabA | 1948049..1948408 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| EEB07_RS10135 (EEB07_10135) | - | 1948469..1949212 (+) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EEB07_RS10140 (EEB07_10140) | - | 1949199..1949498 (+) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| EEB07_RS10145 (EEB07_10145) | rsmI | 1949473..1950354 (+) | 882 | WP_017419497.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EEB07_RS10150 (EEB07_10150) | abrB | 1950404..1950694 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| EEB07_RS10155 (EEB07_10155) | metG | 1951177..1953168 (+) | 1992 | WP_025650337.1 | methionine--tRNA ligase | - |
| EEB07_RS10160 (EEB07_10160) | - | 1953249..1954016 (+) | 768 | WP_021494159.1 | TatD family hydrolase | - |
| EEB07_RS10165 (EEB07_10165) | - | 1954151..1955476 (+) | 1326 | WP_014720609.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=324059 EEB07_RS10150 WP_169510469.1 1950404..1950694(-) (abrB) [Bacillus velezensis strain NY12-2]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=324059 EEB07_RS10150 WP_169510469.1 1950404..1950694(-) (abrB) [Bacillus velezensis strain NY12-2]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |